Click here to switch to the map view.

The map label for this gene is yvdQ [H]

Identifier: 49185916

GI number: 49185916

Start: 2877441

End: 2877956

Strand: Reverse

Name: yvdQ [H]

Synonym: BAS2910

Alternate gene names: 49185916

Gene position: 2877956-2877441 (Counterclockwise)

Preceding gene: 49185917

Following gene: 49185914

Centisome position: 55.04

GC content: 38.57

Gene sequence:

>516_bases
ATGGGTATATTAAGTGGAAATCCTCAAAATGAACCGTTACATTACGGAGAAGTATTTGATATTTGGAGTTATCTTCTAGC
TGCACAAGGTGCAATTGCAAGCCACCAAGTATTTATGAATCATACAGGTGATGAAGACTTGAAGAAGTTTTTAGAAGGCT
TAATTGAAAATGATATGAATTCGGAAATAGAAGAGTTAAAAACTCTTTTAAAGGTTAATGGTGTAGCTTTACCGCCTGCT
CCGCCAGAACGACCAGTTGCATCTATCGAAGACATTCCTCCAGGAGCGCGTATTAATGATGCTGAAATTGCAGCTGCTGT
TTCTACAGGATTAGCAGCTGGACTTGTGACATGTAGTCAAGTAATGGGAAAATGCCTTCGAGAAGATGTAGGCATGTTAT
TTGGACAATTTCATATGAAAAAAGCACAAGCAGGTGTAACGTTGCTACGTTTAAGTAAGAAAAAAGGGTGGGTAGTTCCA
CCTCCGTTACATGTAAGAAATTCTGATCAAGCTTAA

Upstream 100 bases:

>100_bases
TAGTAGAAAATCTTTTGCAGGAAAAAGCATACTTAAAAATTTGATTTCAATATTAAAATCAATATTTATTATGATATTTT
CGAAAGGGAGGAATTTAAAA

Downstream 100 bases:

>100_bases
TAAACAAAAATAAAAAAGTGGCATTGGCCACTTTTTTATTTTTTAGATGTATCCTCACGCTTGGATTTATTTATTGTGGA
AGAATCTATATATTCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MGILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHTGDEDLKKFLEGLIENDMNSEIEELKTLLKVNGVALPPA
PPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVMGKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVP
PPLHVRNSDQA

Sequences:

>Translated_171_residues
MGILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHTGDEDLKKFLEGLIENDMNSEIEELKTLLKVNGVALPPA
PPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVMGKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVP
PPLHVRNSDQA
>Mature_170_residues
GILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHTGDEDLKKFLEGLIENDMNSEIEELKTLLKVNGVALPPAP
PERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVMGKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVPP
PLHVRNSDQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021617
- InterPro:   IPR012347 [H]

Pfam domain/function: PF11553 DUF3231 [H]

EC number: NA

Molecular weight: Translated: 18450; Mature: 18319

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHTGDEDLKKFLEGLIENDMN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
SEIEELKTLLKVNGVALPPAPPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQ
HHHHHHHHHHHHCCEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VMGKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVPPPLHVRNSDQA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHTGDEDLKKFLEGLIENDMN
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
SEIEELKTLLKVNGVALPPAPPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQ
HHHHHHHHHHHHCCEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VMGKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVPPPLHVRNSDQA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]