Click here to switch to the map view.

The map label for this gene is 49185710

Identifier: 49185710

GI number: 49185710

Start: 2684554

End: 2684841

Strand: Reverse

Name: 49185710

Synonym: BAS2704

Alternate gene names: NA

Gene position: 2684841-2684554 (Counterclockwise)

Preceding gene: 49185711

Following gene: 49185709

Centisome position: 51.35

GC content: 35.07

Gene sequence:

>288_bases
ATGGGAGACACATCCTCACTAATTACAGTCTTTTTATGCATTGCACTACTAATATTTTGGCGTCGTTATCGCTCTATGCA
TAGGCCAATAAAGGGATCAGGAAAACGTATTTTATGGCCATTATTATTTTTAACACCAGGGATTATATGGTTTTTTGGCC
CCGTACATCCAGCTATATTACAAGTAATTATAGCGGTATTCATTGGTGTACTTTTTGCTGTGCCGCTTATAGTATTAACA
AATTATGAACGAAGAGATGATGGGAATATTTATACGAAAAAAATGTAG

Upstream 100 bases:

>100_bases
TTATTTTCATATATATTGTAATAAGCGCACTATTTATTCGTAAGGTTTCATTTGAAGATACAATTTAAATACATTTAATT
TAAGGGAGAAGGAAGATTAA

Downstream 100 bases:

>100_bases
CTTTTTTAATTACTTTTATTGCACTTGTCGTTTTAAGGTATGGCTCAAGAAGATTTATTGTGGATTTAGATCAACAAACG
GTTGGTTTATTATTTTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: Ccdc Protein

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MGDTSSLITVFLCIALLIFWRRYRSMHRPIKGSGKRILWPLLFLTPGIIWFFGPVHPAILQVIIAVFIGVLFAVPLIVLT
NYERRDDGNIYTKKM

Sequences:

>Translated_95_residues
MGDTSSLITVFLCIALLIFWRRYRSMHRPIKGSGKRILWPLLFLTPGIIWFFGPVHPAILQVIIAVFIGVLFAVPLIVLT
NYERRDDGNIYTKKM
>Mature_94_residues
GDTSSLITVFLCIALLIFWRRYRSMHRPIKGSGKRILWPLLFLTPGIIWFFGPVHPAILQVIIAVFIGVLFAVPLIVLTN
YERRDDGNIYTKKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10947; Mature: 10816

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTSSLITVFLCIALLIFWRRYRSMHRPIKGSGKRILWPLLFLTPGIIWFFGPVHPAIL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
QVIIAVFIGVLFAVPLIVLTNYERRDDGNIYTKKM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC
>Mature Secondary Structure 
GDTSSLITVFLCIALLIFWRRYRSMHRPIKGSGKRILWPLLFLTPGIIWFFGPVHPAIL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
QVIIAVFIGVLFAVPLIVLTNYERRDDGNIYTKKM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA