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The map label for this gene is glpQ [H]

Identifier: 49185492

GI number: 49185492

Start: 2487214

End: 2488077

Strand: Direct

Name: glpQ [H]

Synonym: BAS2484

Alternate gene names: 49185492

Gene position: 2487214-2488077 (Clockwise)

Preceding gene: 49185491

Following gene: 49185494

Centisome position: 47.57

GC content: 30.56

Gene sequence:

>864_bases
ATGAAAAAGATATATATCGTTACAATCATTTGCACCTTTATAGTACTAGGTACTTTTATTTTTCATAAAGTAAATGAACT
TAAGTACACGAAAGCTATTAATCAATCAAATCATATAAAAAACATTGCACATAGAGGGGCTTCTGCGTATGCGCCTGAAC
ATACAATAGCAGCATATAAATTGGGACAACAATTAAAAGGCGATTATATAGAAATAGATCTTCAAATGACAAAAGATGGA
CATTTAGTAGCTATGCATGATGAAACAGTAAATCGTACTACAAATGGTACAGGGCTAGTTAAGGAACATACATTAGAGGA
ATTAAAGCAATTAAATGCAGGTTCTACTTACAATAAAAAGTATCCAAATTTAGCAAAGAAAGAATATGAAAATGCTAAAG
TTCCAACACTAGAAGAAGTAATTGAAGTGTTTGGGCATGACGCGAACTATTATATTGAAACCAAATCACCTGATGAATAT
CCAGGAATGGAAGAAAAGTTATTAGAAATTATCAATCACTATGAAATACAGGATAAAGTTATTATTCAATCATTTAGTGA
AGTAAGTTTGCAAAAGCTACATAGTTTACATGTTAATATACCTCTAGCCCAATTACTATCTTACAAAAAGGCAGTTCAAT
TAACTGAATCAGAGATAAAAAAGTATAAAACATACTGCATCGGTCTTGGTATGAACTACAAATATATTGATGCAGCTTAT
GTAAAGAGAATAAAGAAACATGGATTAGAAGTTCATCCATTTACTGTAGATAATGAAACAGACATGAAAAAGCTAATTTT
ATGGGGCGTTGACGGGATGTTTACGAATTATCCGGATCGATTATATTCATTATTAAAGTCTTAA

Upstream 100 bases:

>100_bases
TTTTCAATCTGTTGGACAAATGACGGTATTTGAAAATCGACATTTATTTGAATAAATTATCCAAGCCAAATTGCTTTTAT
GTAGGGGTTAATACATCATT

Downstream 100 bases:

>100_bases
TTAAAAGATACTATTTTTAACGTAATAGTTTATAGAAAAAGAATCCAATACTTTTATTGGATTCTTTTTATTTAGCTATA
AGTGACTAACTTAAAGCAGT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKKIYIVTIICTFIVLGTFIFHKVNELKYTKAINQSNHIKNIAHRGASAYAPEHTIAAYKLGQQLKGDYIEIDLQMTKDG
HLVAMHDETVNRTTNGTGLVKEHTLEELKQLNAGSTYNKKYPNLAKKEYENAKVPTLEEVIEVFGHDANYYIETKSPDEY
PGMEEKLLEIINHYEIQDKVIIQSFSEVSLQKLHSLHVNIPLAQLLSYKKAVQLTESEIKKYKTYCIGLGMNYKYIDAAY
VKRIKKHGLEVHPFTVDNETDMKKLILWGVDGMFTNYPDRLYSLLKS

Sequences:

>Translated_287_residues
MKKIYIVTIICTFIVLGTFIFHKVNELKYTKAINQSNHIKNIAHRGASAYAPEHTIAAYKLGQQLKGDYIEIDLQMTKDG
HLVAMHDETVNRTTNGTGLVKEHTLEELKQLNAGSTYNKKYPNLAKKEYENAKVPTLEEVIEVFGHDANYYIETKSPDEY
PGMEEKLLEIINHYEIQDKVIIQSFSEVSLQKLHSLHVNIPLAQLLSYKKAVQLTESEIKKYKTYCIGLGMNYKYIDAAY
VKRIKKHGLEVHPFTVDNETDMKKLILWGVDGMFTNYPDRLYSLLKS
>Mature_287_residues
MKKIYIVTIICTFIVLGTFIFHKVNELKYTKAINQSNHIKNIAHRGASAYAPEHTIAAYKLGQQLKGDYIEIDLQMTKDG
HLVAMHDETVNRTTNGTGLVKEHTLEELKQLNAGSTYNKKYPNLAKKEYENAKVPTLEEVIEVFGHDANYYIETKSPDEY
PGMEEKLLEIINHYEIQDKVIIQSFSEVSLQKLHSLHVNIPLAQLLSYKKAVQLTESEIKKYKTYCIGLGMNYKYIDAAY
VKRIKKHGLEVHPFTVDNETDMKKLILWGVDGMFTNYPDRLYSLLKS

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=144, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1789858, Length=243, Percent_Identity=26.3374485596708, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788572, Length=357, Percent_Identity=25.4901960784314, Blast_Score=87, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17542344, Length=180, Percent_Identity=27.2222222222222, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 33008; Mature: 33008

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYIVTIICTFIVLGTFIFHKVNELKYTKAINQSNHIKNIAHRGASAYAPEHTIAAYK
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH
LGQQLKGDYIEIDLQMTKDGHLVAMHDETVNRTTNGTGLVKEHTLEELKQLNAGSTYNKK
HHHHHCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YPNLAKKEYENAKVPTLEEVIEVFGHDANYYIETKSPDEYPGMEEKLLEIINHYEIQDKV
CCCHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCHHHHH
IIQSFSEVSLQKLHSLHVNIPLAQLLSYKKAVQLTESEIKKYKTYCIGLGMNYKYIDAAY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH
VKRIKKHGLEVHPFTVDNETDMKKLILWGVDGMFTNYPDRLYSLLKS
HHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHCCCHHHHHHHHCC
>Mature Secondary Structure
MKKIYIVTIICTFIVLGTFIFHKVNELKYTKAINQSNHIKNIAHRGASAYAPEHTIAAYK
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH
LGQQLKGDYIEIDLQMTKDGHLVAMHDETVNRTTNGTGLVKEHTLEELKQLNAGSTYNKK
HHHHHCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YPNLAKKEYENAKVPTLEEVIEVFGHDANYYIETKSPDEYPGMEEKLLEIINHYEIQDKV
CCCHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCHHHHH
IIQSFSEVSLQKLHSLHVNIPLAQLLSYKKAVQLTESEIKKYKTYCIGLGMNYKYIDAAY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH
VKRIKKHGLEVHPFTVDNETDMKKLILWGVDGMFTNYPDRLYSLLKS
HHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]