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The map label for this gene is 49185221

Identifier: 49185221

GI number: 49185221

Start: 2216255

End: 2216797

Strand: Direct

Name: 49185221

Synonym: BAS2212

Alternate gene names: NA

Gene position: 2216255-2216797 (Clockwise)

Preceding gene: 49185220

Following gene: 49185223

Centisome position: 42.39

GC content: 30.39

Gene sequence:

>543_bases
ATGTTAGTAGCGGAAAATAGAACAAATGAATTCACATATAATGTACAAGCAATTAAAAATATTTTATTTTCTGGAGATAC
ATCATCTATTCATGCTTTAGAAAAGCTTTTGAATGATACAGTTCAATTTGATGTTCTAGAACAAGAGGTGCTTGATAGAC
AGTACATCCCGAAAGAAGCGAAGAACTTCTTTGATAAAAACGGAACATTTCTTTATCGTGTATCTCATGTTAGCTATAAA
GGAAAAGTGTTATCTGAAAATCTAATTTTTGCAGACACTTCGTTTTTACCAAATACAATTAAGAGTGAATTAGAGAGTGG
AAACATTCCAGTTGAAAAACTTATAGAGAAAATGGAAGTAAGAAGAAATGTATTATACGAAGGGTATCAGCCCTCTGGAA
ATATTATTGAATTATTTGATGGATGCTCTGTTTCGGCGAATGTGTATCCAACTAGAAAATATCAAATTGTAAGTAACTGC
AAATGTATATTTTATATTTGCGAGGTGTATCATGCTGAGAATATAAAGGAATTACTTAAATAA

Upstream 100 bases:

>100_bases
TAAGTAGTAAAGAAGTCACCGAAATTACACAGTTGGACGCAGTAGCGCTTTTAACTTATAAATAAGTTAAATAAAATATT
TTATAGAAGAGGTGTTCCTC

Downstream 100 bases:

>100_bases
AACAAGAAACCAGCCTATAAAATGGCTGGTTTCTTGTTTATTTCACAGCTTCTTTTAACTCTTTACCTGCTTTAAATGCA
GGAACTTTACCAGCAGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLVAENRTNEFTYNVQAIKNILFSGDTSSIHALEKLLNDTVQFDVLEQEVLDRQYIPKEAKNFFDKNGTFLYRVSHVSYK
GKVLSENLIFADTSFLPNTIKSELESGNIPVEKLIEKMEVRRNVLYEGYQPSGNIIELFDGCSVSANVYPTRKYQIVSNC
KCIFYICEVYHAENIKELLK

Sequences:

>Translated_180_residues
MLVAENRTNEFTYNVQAIKNILFSGDTSSIHALEKLLNDTVQFDVLEQEVLDRQYIPKEAKNFFDKNGTFLYRVSHVSYK
GKVLSENLIFADTSFLPNTIKSELESGNIPVEKLIEKMEVRRNVLYEGYQPSGNIIELFDGCSVSANVYPTRKYQIVSNC
KCIFYICEVYHAENIKELLK
>Mature_180_residues
MLVAENRTNEFTYNVQAIKNILFSGDTSSIHALEKLLNDTVQFDVLEQEVLDRQYIPKEAKNFFDKNGTFLYRVSHVSYK
GKVLSENLIFADTSFLPNTIKSELESGNIPVEKLIEKMEVRRNVLYEGYQPSGNIIELFDGCSVSANVYPTRKYQIVSNC
KCIFYICEVYHAENIKELLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20739; Mature: 20739

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAENRTNEFTYNVQAIKNILFSGDTSSIHALEKLLNDTVQFDVLEQEVLDRQYIPKEA
CEECCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KNFFDKNGTFLYRVSHVSYKGKVLSENLIFADTSFLPNTIKSELESGNIPVEKLIEKMEV
HHHHCCCCEEEEEEECCCCCCEEECCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHH
RRNVLYEGYQPSGNIIELFDGCSVSANVYPTRKYQIVSNCKCIFYICEVYHAENIKELLK
HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLVAENRTNEFTYNVQAIKNILFSGDTSSIHALEKLLNDTVQFDVLEQEVLDRQYIPKEA
CEECCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KNFFDKNGTFLYRVSHVSYKGKVLSENLIFADTSFLPNTIKSELESGNIPVEKLIEKMEV
HHHHCCCCEEEEEEECCCCCCEEECCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHH
RRNVLYEGYQPSGNIIELFDGCSVSANVYPTRKYQIVSNCKCIFYICEVYHAENIKELLK
HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA