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The map label for this gene is ycgF [H]

Identifier: 49184529

GI number: 49184529

Start: 1545734

End: 1546366

Strand: Direct

Name: ycgF [H]

Synonym: BAS1514

Alternate gene names: 49184529

Gene position: 1545734-1546366 (Clockwise)

Preceding gene: 49184528

Following gene: 49184530

Centisome position: 29.56

GC content: 33.49

Gene sequence:

>633_bases
ATGTTTGGAGCGATTATACAACAAATTGTATTAGGAATTTCATTAGCGGCGCCGGTAGGTCCGATTAATATTGAAATGTT
AAAACGAGGAATTGAACGAGGTTTTTGGCATGCTTGGATTGTTGGAATTGGTGGTATGACTGCAGATATTTTGTTCATGC
TTCTCATCTACTTCGGTTTATCTTCTCTGTTTATGTATACATATGTACAAGCTTTTATGTATTGCACAGGGTTTTTCTTA
TTATTTTATTTAGGATTTCAAAGTGTAAAACAAGGAATTTCTCACTCGAATATGGAATATAAAAAGGAAGAGGTAGGCGG
CCTTAAACAATCGTTTATGGCAGGTTTTTTCATTGCAATATCTAATCCATTAAATCTTGTTTTTTGGTTTGGTATATACG
GTAGTACACTTAGCTCATTGCTTACGAAGGTAACGAAACAAGAAGCCTTTTTGTACAGTCTTTGTATTATCGTTGGTATT
ATTTTATGGAATTTAAATATTGCTTTTTCTGTCCATTTTGGCAGAACTTTATTAAAGCAAAAAGCACTTGGCTATATAAC
AGCCGGAGCAGGTATTATTCTAGTAGGATATTCTATCCATTTTGCATACAAAGCTTTACAGTTGTTCACATAA

Upstream 100 bases:

>100_bases
AAAAAAGGGTATTTTAGTAGTACATATTTTGATGAAAGCTAGTCTATTTTCAATCATTACATCATTACTTAATAGTAAAG
GAAGTAGAAAGGATAGAGCG

Downstream 100 bases:

>100_bases
GATTGAAGGGGAGATTTTTATGTATCGAACCACTATTGACGGAAAAGAAATCATTATTACGTTAGCACCAAAAATCAGAA
AAGAAATTACTGATAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWIVGIGGMTADILFMLLIYFGLSSLFMYTYVQAFMYCTGFFL
LFYLGFQSVKQGISHSNMEYKKEEVGGLKQSFMAGFFIAISNPLNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGI
ILWNLNIAFSVHFGRTLLKQKALGYITAGAGIILVGYSIHFAYKALQLFT

Sequences:

>Translated_210_residues
MFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWIVGIGGMTADILFMLLIYFGLSSLFMYTYVQAFMYCTGFFL
LFYLGFQSVKQGISHSNMEYKKEEVGGLKQSFMAGFFIAISNPLNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGI
ILWNLNIAFSVHFGRTLLKQKALGYITAGAGIILVGYSIHFAYKALQLFT
>Mature_210_residues
MFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWIVGIGGMTADILFMLLIYFGLSSLFMYTYVQAFMYCTGFFL
LFYLGFQSVKQGISHSNMEYKKEEVGGLKQSFMAGFFIAISNPLNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGI
ILWNLNIAFSVHFGRTLLKQKALGYITAGAGIILVGYSIHFAYKALQLFT

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23444; Mature: 23444

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWIVGIGGMTADILFMLLIYFGL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SSLFMYTYVQAFMYCTGFFLLFYLGFQSVKQGISHSNMEYKKEEVGGLKQSFMAGFFIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
SNPLNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHH
KALGYITAGAGIILVGYSIHFAYKALQLFT
HHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFGAIIQQIVLGISLAAPVGPINIEMLKRGIERGFWHAWIVGIGGMTADILFMLLIYFGL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SSLFMYTYVQAFMYCTGFFLLFYLGFQSVKQGISHSNMEYKKEEVGGLKQSFMAGFFIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
SNPLNLVFWFGIYGSTLSSLLTKVTKQEAFLYSLCIIVGIILWNLNIAFSVHFGRTLLKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHH
KALGYITAGAGIILVGYSIHFAYKALQLFT
HHHHHHCCCCCEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]