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The map label for this gene is ypbG [H]

Identifier: 49184414

GI number: 49184414

Start: 1427894

End: 1428487

Strand: Direct

Name: ypbG [H]

Synonym: BAS1397

Alternate gene names: 49184414

Gene position: 1427894-1428487 (Clockwise)

Preceding gene: 49184413

Following gene: 49184415

Centisome position: 27.31

GC content: 31.31

Gene sequence:

>594_bases
ATGATATGGATTATATTATTCAGTACTTTCATAGGCATGGGGATTTTATTACTTTTTGTGATGTATAAAGAAGCGATGCG
TAATACGGTGTTGGAACATACTTTAGTATTTAAAGAATTTCCGAAAAGTTTTCAAAAAGTAAATGTGTTTTTTATTTCTG
ATATTCATAGAAGGGTCATTTCAAATTTGTTAATTGAACAAGTAAAAGGAAAAGTAGATCTCGTAATTATCGGAGGAGAT
TTAGCAGAGAAAGGTGTCTCTTTATCAAAAATCTCTGCGAATATTCAAAAGTTAAGAGAGATAGGTCCTGTATATTTTGT
GTGGGGAAACAATGATTATGAGATAGAATATCATGAATTAGATGCGTTATTATTAGAAAATAACGTAAAAGTTTTAGATA
ATACAAGAGTGGTATTTGAGTCTGAATTAGGAGAGAAAATTTGTTTGCTCGGTATAGATGATGTTGGATTGCACCGTGAT
CGTCTAGATTTGGCATTGGCGGATTGTAAAGAAGATGGTTTTCGTATCCTAGTTAGTCACAACCCTGATATAATAAAAAA
ATGTCTGGAAATGAACAGATTTCACTTGTGTTAA

Upstream 100 bases:

>100_bases
GATAAAAGATAAGTCCACAAAGCAAGAAAGCTAGCGAGTTAAGCGATCACAGTTTGTTATAAAAGCCTAGGATTATCTTT
ATGAGGAGGGAGTCAAAAAT

Downstream 100 bases:

>100_bases
GTGGACATACGCATGGAGGGCAGATTCGATTATTCCCATCTAAAAAATATTTAAAAGGTGGCGTATATAAGCATTCAAAT
ATAACTCTTTTTGTTAGTAA

Product: DNA repair exonuclease; phosphoesterase, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MIWIILFSTFIGMGILLLFVMYKEAMRNTVLEHTLVFKEFPKSFQKVNVFFISDIHRRVISNLLIEQVKGKVDLVIIGGD
LAEKGVSLSKISANIQKLREIGPVYFVWGNNDYEIEYHELDALLLENNVKVLDNTRVVFESELGEKICLLGIDDVGLHRD
RLDLALADCKEDGFRILVSHNPDIIKKCLEMNRFHLC

Sequences:

>Translated_197_residues
MIWIILFSTFIGMGILLLFVMYKEAMRNTVLEHTLVFKEFPKSFQKVNVFFISDIHRRVISNLLIEQVKGKVDLVIIGGD
LAEKGVSLSKISANIQKLREIGPVYFVWGNNDYEIEYHELDALLLENNVKVLDNTRVVFESELGEKICLLGIDDVGLHRD
RLDLALADCKEDGFRILVSHNPDIIKKCLEMNRFHLC
>Mature_197_residues
MIWIILFSTFIGMGILLLFVMYKEAMRNTVLEHTLVFKEFPKSFQKVNVFFISDIHRRVISNLLIEQVKGKVDLVIIGGD
LAEKGVSLSKISANIQKLREIGPVYFVWGNNDYEIEYHELDALLLENNVKVLDNTRVVFESELGEKICLLGIDDVGLHRD
RLDLALADCKEDGFRILVSHNPDIIKKCLEMNRFHLC

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 22667; Mature: 22667

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWIILFSTFIGMGILLLFVMYKEAMRNTVLEHTLVFKEFPKSFQKVNVFFISDIHRRVI
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
SNLLIEQVKGKVDLVIIGGDLAEKGVSLSKISANIQKLREIGPVYFVWGNNDYEIEYHEL
HHHHHHHHCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHH
DALLLENNVKVLDNTRVVFESELGEKICLLGIDDVGLHRDRLDLALADCKEDGFRILVSH
HEEEECCCEEEEECCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEC
NPDIIKKCLEMNRFHLC
CHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIWIILFSTFIGMGILLLFVMYKEAMRNTVLEHTLVFKEFPKSFQKVNVFFISDIHRRVI
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH
SNLLIEQVKGKVDLVIIGGDLAEKGVSLSKISANIQKLREIGPVYFVWGNNDYEIEYHEL
HHHHHHHHCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHH
DALLLENNVKVLDNTRVVFESELGEKICLLGIDDVGLHRDRLDLALADCKEDGFRILVSH
HEEEECCCEEEEECCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEC
NPDIIKKCLEMNRFHLC
CHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]