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The map label for this gene is liaF [H]

Identifier: 49184363

GI number: 49184363

Start: 1378341

End: 1379081

Strand: Direct

Name: liaF [H]

Synonym: BAS1346

Alternate gene names: 49184363

Gene position: 1378341-1379081 (Clockwise)

Preceding gene: 49184362

Following gene: 49184364

Centisome position: 26.36

GC content: 34.28

Gene sequence:

>741_bases
ATGAAGAAGCATTTTTCAAAAACACAATTAATGGGGATGCTCCTCATCATATTTGGATTCGGTCTTTTTCTTGATATGAT
ACTTGGACATTTTGAACCAGGTGGTCTTATTTTTGCATTTATTATGCTTATGTTTGGAAGGCATTATCGTAAAAAGAATC
GTTATGTACGGGGAAATGTATTTTTATTTGTTGGTGGTATCGTATTTTTATTCTTCTTATTTTCATCAGCAGCATTTGTT
CTTGTCGTATTTGCTTGTTTAGCTTTAATTGGTTATCAATTGATTCAACAAGGACATAAGCAAAAGGCAATGAAGGTTGA
AATTAAAGAAAAAGGGATTATAGACGAAGAGAAGCAAATATATCGTACAGAACCATATTTAAAAAACATGTTTGTAGGTA
ATGTACGAATGATGGATCATATTTATGAACTTGAGGATATTAATGTTCAATATGGTGCTTGTGATGTGGAAATAGATTTA
ACAACTGCTATGATTCCTGAAGGGGAGACGGTAATTGTTATTCGGGGTGTCGTTGGTAATATTCGTTTATATGTGCCATA
TGATATTGAACTGTCTTTAAATCATTCTGTTATTGTCGGACGTGTGCTCTTGCCAGGTCATGAGGAGACAGGGTTTAACC
GTAATGTTACATTTAGAACAGAGCAGTATAAAGAGGCTCCTCGTCGTATTAAAATTATTTCTTCGCTTGTCGTAGGCGAT
ACGGAAGTGAGGAAAGTATAA

Upstream 100 bases:

>100_bases
TATATTATAAAACAGGCTTATGATATAGTGATAGGAGAAAAGGTGTTGGAAAGCAATGCCTTTTCTTCTATGTATATGTG
ACAAGAAGGGGGGAGCTGAA

Downstream 100 bases:

>100_bases
TGAAGAAACAAAAAAATATTTCGTGCATGTATATTCGTTATTCTATGTTGTCCTCAGTTAGTATCGCACTCATTTGTACA
ATTGTATATGTATGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKKHFSKTQLMGMLLIIFGFGLFLDMILGHFEPGGLIFAFIMLMFGRHYRKKNRYVRGNVFLFVGGIVFLFFLFSSAAFV
LVVFACLALIGYQLIQQGHKQKAMKVEIKEKGIIDEEKQIYRTEPYLKNMFVGNVRMMDHIYELEDINVQYGACDVEIDL
TTAMIPEGETVIVIRGVVGNIRLYVPYDIELSLNHSVIVGRVLLPGHEETGFNRNVTFRTEQYKEAPRRIKIISSLVVGD
TEVRKV

Sequences:

>Translated_246_residues
MKKHFSKTQLMGMLLIIFGFGLFLDMILGHFEPGGLIFAFIMLMFGRHYRKKNRYVRGNVFLFVGGIVFLFFLFSSAAFV
LVVFACLALIGYQLIQQGHKQKAMKVEIKEKGIIDEEKQIYRTEPYLKNMFVGNVRMMDHIYELEDINVQYGACDVEIDL
TTAMIPEGETVIVIRGVVGNIRLYVPYDIELSLNHSVIVGRVLLPGHEETGFNRNVTFRTEQYKEAPRRIKIISSLVVGD
TEVRKV
>Mature_246_residues
MKKHFSKTQLMGMLLIIFGFGLFLDMILGHFEPGGLIFAFIMLMFGRHYRKKNRYVRGNVFLFVGGIVFLFFLFSSAAFV
LVVFACLALIGYQLIQQGHKQKAMKVEIKEKGIIDEEKQIYRTEPYLKNMFVGNVRMMDHIYELEDINVQYGACDVEIDL
TTAMIPEGETVIVIRGVVGNIRLYVPYDIELSLNHSVIVGRVLLPGHEETGFNRNVTFRTEQYKEAPRRIKIISSLVVGD
TEVRKV

Specific function: Unknown

COG id: COG4758

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016975 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28240; Mature: 28240

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHFSKTQLMGMLLIIFGFGLFLDMILGHFEPGGLIFAFIMLMFGRHYRKKNRYVRGNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCC
FLFVGGIVFLFFLFSSAAFVLVVFACLALIGYQLIQQGHKQKAMKVEIKEKGIIDEEKQI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCHHHH
YRTEPYLKNMFVGNVRMMDHIYELEDINVQYGACDVEIDLTTAMIPEGETVIVIRGVVGN
HHCCHHHHHHHHCCHHHHHHHHHHHCCCEEECEEEEEEEEEEEECCCCCEEEEEEECCCC
IRLYVPYDIELSLNHSVIVGRVLLPGHEETGFNRNVTFRTEQYKEAPRRIKIISSLVVGD
EEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCC
TEVRKV
HHHCCC
>Mature Secondary Structure
MKKHFSKTQLMGMLLIIFGFGLFLDMILGHFEPGGLIFAFIMLMFGRHYRKKNRYVRGNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCC
FLFVGGIVFLFFLFSSAAFVLVVFACLALIGYQLIQQGHKQKAMKVEIKEKGIIDEEKQI
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCHHHH
YRTEPYLKNMFVGNVRMMDHIYELEDINVQYGACDVEIDLTTAMIPEGETVIVIRGVVGN
HHCCHHHHHHHHCCHHHHHHHHHHHCCCEEECEEEEEEEEEEEECCCCCEEEEEEECCCC
IRLYVPYDIELSLNHSVIVGRVLLPGHEETGFNRNVTFRTEQYKEAPRRIKIISSLVVGD
EEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCC
TEVRKV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]