Click here to switch to the map view.

The map label for this gene is yhfW [H]

Identifier: 49184249

GI number: 49184249

Start: 1275444

End: 1276637

Strand: Direct

Name: yhfW [H]

Synonym: BAS1232

Alternate gene names: 49184249

Gene position: 1275444-1276637 (Clockwise)

Preceding gene: 49184248

Following gene: 49184250

Centisome position: 24.39

GC content: 34.84

Gene sequence:

>1194_bases
ATGAACCTTATAAGTGGTAAGTTGTTTTGGAATAGAGGAGTTTCTGTACCTTGTTATCCACCGTTAGAAAATGATATGAT
ATGTGATGTGCTTGTAGTCGGAAGTGGCGAAGCAGGTGCCCATATAGCGTATTTTTTAGCGAAAATTGGCATGAGTGTGA
TGCTTATTGAAAAAAGAGAAATTGCATGTGGTAGTACATTTGCAAATGTAGGTTTATTACAGTTTTTTCATGATAAATCG
TTAACCTCACTTATTCATACATTTGGTGAAGAAAAAGGGGTACGAGCATATAAGCTTTGTTACGAAGCGTTACGAACAAT
GGAGAAAGTTGTACCGACTCTCGATATTGATCCCCAGTTTATTCCACGAAATAGTTTATATTATGCAAGTAAAAGTGAAG
ATGTCTCATCTTTACAAGAGGAGTACAATACGTTACAGAAATATGGACTTCCTGTTGAGTATTTTACAGAAGTTGATATT
AAGGAACGTTATTCCTTTACAAAACAAGCGGCATTATATACACATGGTGATGCTGAGGTAAATCCGTATTTATTAGCGCA
TAGTCTTTTGCATAAAGCAAATCAAATGGGTGCTATTATACATGAACATACAGAGGTCATACATATAAAAAAACGTCAAA
ATGATTTAATTTGTTATACGAAAACAGGAAATCAAATTGTAGCAAAGAATATTATTATGGCGACGGGCTATGAAGCGCTT
TTTGGGAAGAAAGAAAAAAATACAACAGTAGAGACATCTTATGCAGTTGTGACAAATGAAATAGATCAGTTTGAAGGCTG
GCATGAGCGATCATTGATTTGGGAAACAGCACGTCCCTACTTATATTTTCGGACGTATAAAAACCGCATTATGGTAGGCG
GATTAGATGAAGCGATGCAAATTCAATCGATTGGTGATACGAAACTATTGCATAAGCGTGATATCCTTATTAACATTGTA
AGAGAGATGTTCCCCCAGTATAAGAATATACAAGCAGAGTATTATTGGGCAGCAGCATTTGGCAGTAGTCATGATGGTCT
TCCTATTTTAAAAGAAGACAAAAAGATACATAATTTATTTTACGCATTACTGCACGGAGGTAATGGAACTGTGTATGGAA
TGGTATTTGCAAAAATATTTGAGCAGTTATTTACAAATAAAGAAAGGGAAGATTTTTCTTTATTTAATCGATAG

Upstream 100 bases:

>100_bases
AGTAAAAATGAAAAATCCAACTAGCGTTGTGTTAGTTGGATTTTTTTATGGAAAATAACAAAACATAGAAAGGAGAAATT
TATATTGTAGGAGTATAATT

Downstream 100 bases:

>100_bases
AAAAAAGGTAGCGAAGTGATGGAATGAGAGATATAAAAAAGTTTTTACAAAAATTGCGTCCCGTACAACTCATTGTTTTA
TTTTATTTATTAGCAGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKREIACGSTFANVGLLQFFHDKS
LTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSSLQEEYNTLQKYGLPVEYFTEVDI
KERYSFTKQAALYTHGDAEVNPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQIQSIGDTKLLHKRDILINIV
REMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLFYALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR

Sequences:

>Translated_397_residues
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKREIACGSTFANVGLLQFFHDKS
LTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSSLQEEYNTLQKYGLPVEYFTEVDI
KERYSFTKQAALYTHGDAEVNPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQIQSIGDTKLLHKRDILINIV
REMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLFYALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
>Mature_397_residues
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKREIACGSTFANVGLLQFFHDKS
LTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQFIPRNSLYYASKSEDVSSLQEEYNTLQKYGLPVEYFTEVDI
KERYSFTKQAALYTHGDAEVNPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQIQSIGDTKLLHKRDILINIV
REMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLFYALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI24797151, Length=388, Percent_Identity=23.4536082474227, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1787559, Length=385, Percent_Identity=22.0779220779221, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45489; Mature: 45489

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKRE
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCC
IACGSTFANVGLLQFFHDKSLTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IPRNSLYYASKSEDVSSLQEEYNTLQKYGLPVEYFTEVDIKERYSFTKQAALYTHGDAEV
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHEEEECCCCCC
NPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCEEEHHHEEEECCCHHH
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQ
HCCCCCCCEEEEEEEEEECCHHHHCCCHHHCEEEECCCCEEEEEEECCEEEECCCCHHHH
IQSIGDTKLLHKRDILINIVREMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLF
HHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH
YALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure
MNLISGKLFWNRGVSVPCYPPLENDMICDVLVVGSGEAGAHIAYFLAKIGMSVMLIEKRE
CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCC
IACGSTFANVGLLQFFHDKSLTSLIHTFGEEKGVRAYKLCYEALRTMEKVVPTLDIDPQF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
IPRNSLYYASKSEDVSSLQEEYNTLQKYGLPVEYFTEVDIKERYSFTKQAALYTHGDAEV
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHEEEECCCCCC
NPYLLAHSLLHKANQMGAIIHEHTEVIHIKKRQNDLICYTKTGNQIVAKNIIMATGYEAL
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCEEEHHHEEEECCCHHH
FGKKEKNTTVETSYAVVTNEIDQFEGWHERSLIWETARPYLYFRTYKNRIMVGGLDEAMQ
HCCCCCCCEEEEEEEEEECCHHHHCCCHHHCEEEECCCCEEEEEEECCEEEECCCCHHHH
IQSIGDTKLLHKRDILINIVREMFPQYKNIQAEYYWAAAFGSSHDGLPILKEDKKIHNLF
HHCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHH
YALLHGGNGTVYGMVFAKIFEQLFTNKEREDFSLFNR
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]