Click here to switch to the map view.

The map label for this gene is ydhJ [H]

Identifier: 49184053

GI number: 49184053

Start: 1088044

End: 1089021

Strand: Direct

Name: ydhJ [H]

Synonym: BAS1033

Alternate gene names: 49184053

Gene position: 1088044-1089021 (Clockwise)

Preceding gene: 49184052

Following gene: 49184056

Centisome position: 20.81

GC content: 35.17

Gene sequence:

>978_bases
GTGATCATATCAGATGTGCTATACGGAGAATTTAAAGTCGATCCAGTAGTAGAAGAATTAATCTTAAGTAAGTCTGTGCA
AAGACTAAAAGGTATTCATCAAACTGGCGCAAGTTATTTAGTGAACAAGGAATGGAATGTAACGCGCTTTGATCATTCAG
TTGGTGTTATGTTGTTAGTTAAAAAGCTAGGTGGTTCAGTAGAAGAGCAAATTGCAGGTTTACTGCACGACGTATCACAT
ACTGCTTTTTCTCATGTGATTGATTACGTTTTTGATAATAGAAATGAAAGTTATCATGAAGAGATATTTAGTTCTGTTGT
GAAAAACTCAGAAATTCCAGCGATTCTTGCAAAGTATGGCTATAACTATGAAGATATTTTATTAGATGATTCGAAGTGGA
CGTTACTGGAACGGTCAGCGCCCGAATTATGCGCAGATCGAGTGGATTATACGTTACGAGATATGTATACATATGGGTAT
ATTTCTTTAGAAGAAGCTCACAGTTTTTTAGAAGATGTAATTGAAGTAAACGGAAAAATGGTCCTTCAAAACATCGAAAT
GGCAGAGTGGTTTACAGAAACGTATTACAAAGAAGTCATCGATTTCTTTATGCAACCAATGAATAGTTACGGAAATGATA
TGTTAGCTAAGACGCTAAAGTTAGCTCTACACAAAAAGGTTATTCATGCAGATGATTTTCTTCTTGAAGATGATGAGCTT
ATTTTGAAATTGCAGCAATGTAGTGATTCAGAAGTACATGCTTTATTAAGCAAAGTTCATCCGAATGTAAAAGTAAAAGA
AGATAAAAACGATTATGATTTGTATCAGAAAAATAAAGTACGTCTTATTGATCCACCGTTACTTTGTGAGGGGGAAGTCG
TTCCATCGTCTGTTGTGTCAGAAAACATAAGACAGATGAGTGATAGCGTTTATGAACAAGCGGTGAGAGGGATGTATGTG
AAAGTGGTTTCAGATTAA

Upstream 100 bases:

>100_bases
ACAACATTTAAAATTTGATATCTATATATTTAAATTTAATATTTGTGTTGGCGTCGATTTCATAAAAGAGTTACGATTAT
AAGATAAAGGGGGATTATAA

Downstream 100 bases:

>100_bases
AAAGTAGAGCATCACTCCTAGATGCTCTACTTTTTCACATCACTGATTAAACCAATTCCAAACCTCAATATCTCCAAGAG
TCGCATAACGTACGTGAGGC

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIISDVLYGEFKVDPVVEELILSKSVQRLKGIHQTGASYLVNKEWNVTRFDHSVGVMLLVKKLGGSVEEQIAGLLHDVSH
TAFSHVIDYVFDNRNESYHEEIFSSVVKNSEIPAILAKYGYNYEDILLDDSKWTLLERSAPELCADRVDYTLRDMYTYGY
ISLEEAHSFLEDVIEVNGKMVLQNIEMAEWFTETYYKEVIDFFMQPMNSYGNDMLAKTLKLALHKKVIHADDFLLEDDEL
ILKLQQCSDSEVHALLSKVHPNVKVKEDKNDYDLYQKNKVRLIDPPLLCEGEVVPSSVVSENIRQMSDSVYEQAVRGMYV
KVVSD

Sequences:

>Translated_325_residues
MIISDVLYGEFKVDPVVEELILSKSVQRLKGIHQTGASYLVNKEWNVTRFDHSVGVMLLVKKLGGSVEEQIAGLLHDVSH
TAFSHVIDYVFDNRNESYHEEIFSSVVKNSEIPAILAKYGYNYEDILLDDSKWTLLERSAPELCADRVDYTLRDMYTYGY
ISLEEAHSFLEDVIEVNGKMVLQNIEMAEWFTETYYKEVIDFFMQPMNSYGNDMLAKTLKLALHKKVIHADDFLLEDDEL
ILKLQQCSDSEVHALLSKVHPNVKVKEDKNDYDLYQKNKVRLIDPPLLCEGEVVPSSVVSENIRQMSDSVYEQAVRGMYV
KVVSD
>Mature_325_residues
MIISDVLYGEFKVDPVVEELILSKSVQRLKGIHQTGASYLVNKEWNVTRFDHSVGVMLLVKKLGGSVEEQIAGLLHDVSH
TAFSHVIDYVFDNRNESYHEEIFSSVVKNSEIPAILAKYGYNYEDILLDDSKWTLLERSAPELCADRVDYTLRDMYTYGY
ISLEEAHSFLEDVIEVNGKMVLQNIEMAEWFTETYYKEVIDFFMQPMNSYGNDMLAKTLKLALHKKVIHADDFLLEDDEL
ILKLQQCSDSEVHALLSKVHPNVKVKEDKNDYDLYQKNKVRLIDPPLLCEGEVVPSSVVSENIRQMSDSVYEQAVRGMYV
KVVSD

Specific function: Unknown

COG id: COG1078

COG function: function code R; HD superfamily phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17537829, Length=124, Percent_Identity=37.0967741935484, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17537827, Length=124, Percent_Identity=37.0967741935484, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37339; Mature: 37339

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISDVLYGEFKVDPVVEELILSKSVQRLKGIHQTGASYLVNKEWNVTRFDHSVGVMLLV
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCEEECHHHHHHHHH
KKLGGSVEEQIAGLLHDVSHTAFSHVIDYVFDNRNESYHEEIFSSVVKNSEIPAILAKYG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHC
YNYEDILLDDSKWTLLERSAPELCADRVDYTLRDMYTYGYISLEEAHSFLEDVIEVNGKM
CCCHHEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCHH
VLQNIEMAEWFTETYYKEVIDFFMQPMNSYGNDMLAKTLKLALHKKVIHADDFLLEDDEL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCHHH
ILKLQQCSDSEVHALLSKVHPNVKVKEDKNDYDLYQKNKVRLIDPPLLCEGEVVPSSVVS
HHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCHHHCCCEEEECCCCCCCCCCCCHHHHH
ENIRQMSDSVYEQAVRGMYVKVVSD
HHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MIISDVLYGEFKVDPVVEELILSKSVQRLKGIHQTGASYLVNKEWNVTRFDHSVGVMLLV
CCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCEEECHHHHHHHHH
KKLGGSVEEQIAGLLHDVSHTAFSHVIDYVFDNRNESYHEEIFSSVVKNSEIPAILAKYG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHC
YNYEDILLDDSKWTLLERSAPELCADRVDYTLRDMYTYGYISLEEAHSFLEDVIEVNGKM
CCCHHEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCHH
VLQNIEMAEWFTETYYKEVIDFFMQPMNSYGNDMLAKTLKLALHKKVIHADDFLLEDDEL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCHHH
ILKLQQCSDSEVHALLSKVHPNVKVKEDKNDYDLYQKNKVRLIDPPLLCEGEVVPSSVVS
HHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCHHHCCCEEEECCCCCCCCCCCCHHHHH
ENIRQMSDSVYEQAVRGMYVKVVSD
HHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]