Click here to switch to the map view.

The map label for this gene is ecsB [H]

Identifier: 49184001

GI number: 49184001

Start: 1035200

End: 1036411

Strand: Direct

Name: ecsB [H]

Synonym: BAS0980

Alternate gene names: 49184001

Gene position: 1035200-1036411 (Clockwise)

Preceding gene: 49184000

Following gene: 49184002

Centisome position: 19.8

GC content: 36.88

Gene sequence:

>1212_bases
ATGAATAGCACAGCGTTATGGAAAGAACGATTTCGTCACTTTTTACAAGAAGTTCGTACATATAGTAAATACGTATTTAA
TGATCATTTAAAATTTATTTTCGTATTCATCATCGGCGCAGGAGCGTATTATTACCAGCAATGGTTACAAACGTTAACAC
CTTCGTTTCCGACTGCGCTCGTTATGGCAGTGTTACTTGGACTCGTATTAACAGCCGGATCTATTCAAACGTTATTAAAA
GAAGCAGATCTCGTTTACTTACTGCCAGTTGAAGAAAAGTTAAAACCGTACTTCACAAAGGCATTTCTTTTTACGTTTAT
GATTCAGTTATACATAATCGCCATCGTAGCAGCAGCGCTTGCCCCGTTATACTTCCAGCAAATGAAGCAAACAGGAGCGG
CTTACATATGGATTGTAATCGCGTTTGTCATGGTAAAAGCGTGGAATTTATTCGTAGCATGGGAAAAATCATTCTTAACA
GACCAAAATATACAAAGAGCCGATTGGTTCATTCGATTTATTTTAAACGCCGTATTTGTTTATTTCCTTGTGGAACGTAC
TTCCGTTATGTTTATTGGTGGAATCGTCCTTCTCATGGTGTTATATCTTGCGATCATGCATCAAATGGTGAAGGGAAAAC
CACTAAACTGGGAGTATTTAATTTCTGAAGAAGGTAAAAAGATGATGCTACTGTACCGCATCGCGAACATGTTCGTTGAT
GTACCAGCATTAAAAGAGAGAGTAGCACGTAGAAAATGGCTTGATTTCATTCTGTCGATGATCGGCGAAAAGCGTACATA
TTTATACTTATATACGAGAACGTTCTTAAGATCTGGTAATTATTTTGGATTATATGTGCGTCTGCTCGCTCTTGGAGGAG
TTATTCTTTACTTCATCCCGTTTTTATATGGACGATTTATCGTAAGTCTTATCTTCTTATATTTAATCGGTTATCAGCTA
TTAACTTTATGGAAGCACCACCGCATGAAGATTTGGCTTGATTTGTATCCAGTAGGGGGAGAAGAGAAGAAGAAAGATTT
TCTTACTTTACTAAATGCGATCCTTATTACAGGTAGTATTATCTTTACAATCATATTTCTACTAGCGACGAAAGATTTCA
TGATGACAGGAATTTTACTAGTCGTAAGCATAGTATTTAGTATCGGTTTCGTTTATCAATACGGGGCGAAACGAATTGAG
CGTTTAAATTGA

Upstream 100 bases:

>100_bases
GTAAGAGCGAAGGGAACATTATCTGAACTGCAATTACAGTTTAATATGCCAGGCGCAACGTTAGATGATATTTATATTGC
ATTAACGAAGGAAGAAGATT

Downstream 100 bases:

>100_bases
AGGGAATGAACCTATGATTACATATGAAGAAAAGGTTATAAAAGAGCTGGAGCAGTGGAAAGCTACATTCATGAAAGATT
CTTCTATGATGACACGGTTC

Product: ABC transporter permease EscB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNSTALWKERFRHFLQEVRTYSKYVFNDHLKFIFVFIIGAGAYYYQQWLQTLTPSFPTALVMAVLLGLVLTAGSIQTLLK
EADLVYLLPVEEKLKPYFTKAFLFTFMIQLYIIAIVAAALAPLYFQQMKQTGAAYIWIVIAFVMVKAWNLFVAWEKSFLT
DQNIQRADWFIRFILNAVFVYFLVERTSVMFIGGIVLLMVLYLAIMHQMVKGKPLNWEYLISEEGKKMMLLYRIANMFVD
VPALKERVARRKWLDFILSMIGEKRTYLYLYTRTFLRSGNYFGLYVRLLALGGVILYFIPFLYGRFIVSLIFLYLIGYQL
LTLWKHHRMKIWLDLYPVGGEEKKKDFLTLLNAILITGSIIFTIIFLLATKDFMMTGILLVVSIVFSIGFVYQYGAKRIE
RLN

Sequences:

>Translated_403_residues
MNSTALWKERFRHFLQEVRTYSKYVFNDHLKFIFVFIIGAGAYYYQQWLQTLTPSFPTALVMAVLLGLVLTAGSIQTLLK
EADLVYLLPVEEKLKPYFTKAFLFTFMIQLYIIAIVAAALAPLYFQQMKQTGAAYIWIVIAFVMVKAWNLFVAWEKSFLT
DQNIQRADWFIRFILNAVFVYFLVERTSVMFIGGIVLLMVLYLAIMHQMVKGKPLNWEYLISEEGKKMMLLYRIANMFVD
VPALKERVARRKWLDFILSMIGEKRTYLYLYTRTFLRSGNYFGLYVRLLALGGVILYFIPFLYGRFIVSLIFLYLIGYQL
LTLWKHHRMKIWLDLYPVGGEEKKKDFLTLLNAILITGSIIFTIIFLLATKDFMMTGILLVVSIVFSIGFVYQYGAKRIE
RLN
>Mature_403_residues
MNSTALWKERFRHFLQEVRTYSKYVFNDHLKFIFVFIIGAGAYYYQQWLQTLTPSFPTALVMAVLLGLVLTAGSIQTLLK
EADLVYLLPVEEKLKPYFTKAFLFTFMIQLYIIAIVAAALAPLYFQQMKQTGAAYIWIVIAFVMVKAWNLFVAWEKSFLT
DQNIQRADWFIRFILNAVFVYFLVERTSVMFIGGIVLLMVLYLAIMHQMVKGKPLNWEYLISEEGKKMMLLYRIANMFVD
VPALKERVARRKWLDFILSMIGEKRTYLYLYTRTFLRSGNYFGLYVRLLALGGVILYFIPFLYGRFIVSLIFLYLIGYQL
LTLWKHHRMKIWLDLYPVGGEEKKKDFLTLLNAILITGSIIFTIIFLLATKDFMMTGILLVVSIVFSIGFVYQYGAKRIE
RLN

Specific function: Presumed to form part of an ABC-transporter, it may form a transport channel [H]

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 47245; Mature: 47245

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]