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The map label for this gene is 49183978

Identifier: 49183978

GI number: 49183978

Start: 1013232

End: 1013510

Strand: Direct

Name: 49183978

Synonym: BAS0956

Alternate gene names: NA

Gene position: 1013232-1013510 (Clockwise)

Preceding gene: 49183977

Following gene: 49183979

Centisome position: 19.38

GC content: 33.69

Gene sequence:

>279_bases
ATGATTTTTAGTGAACGCTTAAAAGAAGAACGAGAAAAACGAAATTGGTCGCAAAGTGATTTGGCTGAAAAAATTCATGT
AAGTAGGCAATCTGTTTCGAAATGGGAGACGGGAAAGAACTATCCGAGCATTGAAATTATTATTCATTTAAGCGATCTGT
TCGGTATTACGATTGATGAATTGCTAAGGAGCGATGAAGAATTGACGCAAAAAGTAATTGAAGATAGTAAGCAATTGGCG
TATCCAAAATGGAAGTTTTTTTTGATAGTTTATTTATGA

Upstream 100 bases:

>100_bases
AGCTGTAACGCACAAGTTGCACAGGCTACGCAACGACAACTCGCTTTATCCTTCATCATGTATTTGTCCATACTAGATGT
AGAGAGGTGATAAACACAGT

Downstream 100 bases:

>100_bases
TGGGCGTATTTTTATTTATTACAAAAATCGTTGTATGGATATTAAATAAGTTTGCCGTAGCGAACATTGCAATTATAGCG
GATGCACCGTATGTAATGAA

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Xre Family; HTH-Type Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MIFSERLKEEREKRNWSQSDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDELLRSDEELTQKVIEDSKQLA
YPKWKFFLIVYL

Sequences:

>Translated_92_residues
MIFSERLKEEREKRNWSQSDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDELLRSDEELTQKVIEDSKQLA
YPKWKFFLIVYL
>Mature_92_residues
MIFSERLKEEREKRNWSQSDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDELLRSDEELTQKVIEDSKQLA
YPKWKFFLIVYL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11016; Mature: 11016

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSERLKEEREKRNWSQSDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCCHHH
LLRSDEELTQKVIEDSKQLAYPKWKFFLIVYL
HHCCHHHHHHHHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure
MIFSERLKEEREKRNWSQSDLAEKIHVSRQSVSKWETGKNYPSIEIIIHLSDLFGITIDE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCCHHH
LLRSDEELTQKVIEDSKQLAYPKWKFFLIVYL
HHCCHHHHHHHHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA