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The map label for this gene is 49183877

Identifier: 49183877

GI number: 49183877

Start: 915906

End: 916901

Strand: Direct

Name: 49183877

Synonym: BAS0853

Alternate gene names: NA

Gene position: 915906-916901 (Clockwise)

Preceding gene: 49183876

Following gene: 49183878

Centisome position: 17.52

GC content: 40.76

Gene sequence:

>996_bases
ATGAAGGTTAGTAAAGTGTACACGACAATTGATGCTCACGTAGCTGGGGAACCACTTCGAATTATTACAGGAGGCGTGCC
GGAAATAAAGGGAGAAACGCAGCTAGAAAGACGCTGGTACTGTATGGAACATTTGGATTATCTGCGCGAGGTTCTTATGT
ATGAACCGAGAGGACATCATGGCATGTACGGTTGTATCATTACTCCGCCTGCGAGTGCTCACGCTGATTTTGGTGTATTA
TTTATGCACAACGAAGGATGGAGCACGATGTGTGGTCACGGCATTATCGCTGTTATTACAGTCGGAATTGAAACTGGTAT
GTTTGAAACAAAACAAAAGTTTATTATTGATAGCCCTGCTGGGGAAGTCATTGCGTACGCAAAATATAATGGGAGCGAAG
TAGAGTCTGTATCATTTGAAAATGTTCCTTCATTTGTATACAAAAAAGACGTTCCTATTAAAATAGATAACTATGAATTT
CAAGTAGATATCGCGTTTGGTGGAGCATTTTATGCGGTAGTAGATAGTAAAGAATTTGGCTTGAAAGTTGATTTCAAAGA
CTTATCTGCTATTCAACAGTGGGGCGGTAAAATTAAACATTATATCGAGAGCAAAATGGAAGTAAAACATCCACTTGAAG
AAGGGTTAAAAGGAATATACGGCGTTATTTTCTCGGATGATCCGAAAGGGGAAGGCGCAACGTTGCGAAATGTAACAATC
TTCGCTGATGGGCAAGTAGATCGTTCTCCTTGCGGCACAGGAACTTCCGCAAGAATCGCAACCCTTTTTGAAAAAGGTAT
TTTACAAAAGGGAGAAATATTCATCCACGAATGCATTACTGACGGGGAATTTGAGGGGGAAGTATTGTCGGTAACAGCGG
TACATACATATGAAGCTGTCGTTCCGAAAGTAACAGGGAATGCATTTATTACAGGTTTTCATCAGTTCGTTGTAGACCCG
AGAGATGATTTGAATCGGGGATTTTTGTTAGGATAA

Upstream 100 bases:

>100_bases
TAATGTAAGCTTTTTTAAACAATGTATACAAATTTATACCCTATGCGTTGGCATGATATTTGCAATAAAAAGAGTATTAA
CATATAGGGGAGAGATAGAA

Downstream 100 bases:

>100_bases
GAGGAGGTGGTGGAAAGATATGCTAGTTATAAGCGCGAAAGAACAAAGAGACTTAGTAAATATGAACGAAGTCATTGCAT
ACGCGGCGCTTGCTTTACAA

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGETQLERRWYCMEHLDYLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPAGEVIAYAKYNGSEVESVSFENVPSFVYKKDVPIKIDNYEF
QVDIAFGGAFYAVVDSKEFGLKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDDPKGEGATLRNVTI
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGEFEGEVLSVTAVHTYEAVVPKVTGNAFITGFHQFVVDP
RDDLNRGFLLG

Sequences:

>Translated_331_residues
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGETQLERRWYCMEHLDYLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPAGEVIAYAKYNGSEVESVSFENVPSFVYKKDVPIKIDNYEF
QVDIAFGGAFYAVVDSKEFGLKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDDPKGEGATLRNVTI
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGEFEGEVLSVTAVHTYEAVVPKVTGNAFITGFHQFVVDP
RDDLNRGFLLG
>Mature_331_residues
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGETQLERRWYCMEHLDYLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPAGEVIAYAKYNGSEVESVSFENVPSFVYKKDVPIKIDNYEF
QVDIAFGGAFYAVVDSKEFGLKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDDPKGEGATLRNVTI
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGEFEGEVLSVTAVHTYEAVVPKVTGNAFITGFHQFVVDP
RDDLNRGFLLG

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family

Homologues:

Organism=Homo sapiens, GI21389361, Length=340, Percent_Identity=35.5882352941176, Blast_Score=224, Evalue=7e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y901_BACAN (Q81UH1)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_843412.1
- RefSeq:   YP_017536.1
- RefSeq:   YP_027129.1
- HSSP:   Q4DA80
- ProteinModelPortal:   Q81UH1
- SMR:   Q81UH1
- IntAct:   Q81UH1
- EnsemblBacteria:   EBBACT00000011176
- EnsemblBacteria:   EBBACT00000016455
- EnsemblBacteria:   EBBACT00000023341
- GeneID:   1088813
- GeneID:   2818423
- GeneID:   2853151
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_0901
- KEGG:   bar:GBAA_0901
- KEGG:   bat:BAS0853
- TIGR:   BA_0901
- TIGR:   GBAA_0901
- GeneTree:   EBGT00050000003463
- HOGENOM:   HBG333420
- OMA:   GHGIIAV
- ProtClustDB:   CLSK916010
- BioCyc:   BANT260799:BAS0853-MONOMER
- BioCyc:   BANT261594:GBAA0901-MONOMER
- InterPro:   IPR008794
- PIRSF:   PIRSF029792

Pfam domain/function: PF05544 Pro_racemase

EC number: NA

Molecular weight: Translated: 36648; Mature: 36648

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGETQLERRWYCMEHLDYLREVLMYEPRGHH
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC
GMYGCIITPPASAHADFGVLFMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPA
CEEEEEECCCCCCCCCEEEEEEECCCCCCHHCCCEEEEEEEECCCCCCCCCCEEEEECCC
GEVIAYAKYNGSEVESVSFENVPSFVYKKDVPIKIDNYEFQVDIAFGGAFYAVVDSKEFG
CCEEEEEECCCCCEEEECCCCCCCHHEECCCCEEECCEEEEEEEEECCEEEEEEECCCCC
LKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDDPKGEGATLRNVTI
EEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEEEECCCCCCCCCEEEEEEE
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGEFEGEVLSVTAVHTYEAV
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEHC
VPKVTGNAFITGFHQFVVDPRDDLNRGFLLG
CCCCCCCEEEEEEEEEEECCHHHCCCCCCCC
>Mature Secondary Structure
MKVSKVYTTIDAHVAGEPLRIITGGVPEIKGETQLERRWYCMEHLDYLREVLMYEPRGHH
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCC
GMYGCIITPPASAHADFGVLFMHNEGWSTMCGHGIIAVITVGIETGMFETKQKFIIDSPA
CEEEEEECCCCCCCCCEEEEEEECCCCCCHHCCCEEEEEEEECCCCCCCCCCEEEEECCC
GEVIAYAKYNGSEVESVSFENVPSFVYKKDVPIKIDNYEFQVDIAFGGAFYAVVDSKEFG
CCEEEEEECCCCCEEEECCCCCCCHHEECCCCEEECCEEEEEEEEECCEEEEEEECCCCC
LKVDFKDLSAIQQWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDDPKGEGATLRNVTI
EEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEEEECCCCCCCCCEEEEEEE
FADGQVDRSPCGTGTSARIATLFEKGILQKGEIFIHECITDGEFEGEVLSVTAVHTYEAV
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEHC
VPKVTGNAFITGFHQFVVDPRDDLNRGFLLG
CCCCCCCEEEEEEEEEEECCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629