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The map label for this gene is yrkF [H]

Identifier: 49183765

GI number: 49183765

Start: 795952

End: 796284

Strand: Direct

Name: yrkF [H]

Synonym: BAS0741

Alternate gene names: 49183765

Gene position: 795952-796284 (Clockwise)

Preceding gene: 49183764

Following gene: 49183766

Centisome position: 15.22

GC content: 33.63

Gene sequence:

>333_bases
TTGTACTTGCTGCATGGTTTGTTATTTCACGCTTTTTACCTGTGGAAAGGTGTTCAAAATATAAACGGAAAAGAATTAAA
AAGTATAGTAGGAAAACAGGGAAAGTACTTTATCGATGTTCGTACAGTAGGTGAATATAGAGGAAATCATATGAAAGGAT
TTCAAAATATCCCGCTAAATGACTTAGCTAGTAAGACAAATCAATTAGATAAGAATAGGGAAGTAATCGTTATTTGTCAG
AGCGGAATGAGAAGTAAACAAGCAGCGAAAATGTTAAAAAAATTAGGATTTCAGCATGTTATCAATGTTTCAGGCGGGAT
GAATGGTTTGTGA

Upstream 100 bases:

>100_bases
GAGGAAGGCGATGTGCTGAAGTTTTGGATTAAGAAGGCGTAGTATTTTTATAAATGTAGAGAGGTTGGTTATATGAACAC
AATATTAAGTACGCTTTTCA

Downstream 100 bases:

>100_bases
GGAGGAAATGTAAAATGAAAGAAATGATAGCAAAAGAATTAGAAGAAAAATTGTTACGTAAAGAAGCAGTAAATATCGTA
GACGTACGTGAAGTAGAAGA

Product: rhodanese-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MYLLHGLLFHAFYLWKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKTNQLDKNREVIVICQ
SGMRSKQAAKMLKKLGFQHVINVSGGMNGL

Sequences:

>Translated_110_residues
MYLLHGLLFHAFYLWKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKTNQLDKNREVIVICQ
SGMRSKQAAKMLKKLGFQHVINVSGGMNGL
>Mature_110_residues
MYLLHGLLFHAFYLWKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKTNQLDKNREVIVICQ
SGMRSKQAAKMLKKLGFQHVINVSGGMNGL

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 12424; Mature: 12424

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLLHGLLFHAFYLWKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLN
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH
DLASKTNQLDKNREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL
HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHEEECCCCCCCC
>Mature Secondary Structure
MYLLHGLLFHAFYLWKGVQNINGKELKSIVGKQGKYFIDVRTVGEYRGNHMKGFQNIPLN
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHH
DLASKTNQLDKNREVIVICQSGMRSKQAAKMLKKLGFQHVINVSGGMNGL
HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]