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The map label for this gene is nudF [H]

Identifier: 49183614

GI number: 49183614

Start: 636435

End: 636857

Strand: Direct

Name: nudF [H]

Synonym: BAS0589

Alternate gene names: 49183614

Gene position: 636435-636857 (Clockwise)

Preceding gene: 49183613

Following gene: 49183618

Centisome position: 12.17

GC content: 39.01

Gene sequence:

>423_bases
ATGCAAAGAGTTGATGTCGTATACGCACTAATACATGACGAAGAAACAGATAAAATATTAATGGTACATAATGTAGAACA
AAATGTTTGGTCATTGCCGGGTGGGGCTGTTGAAAAGGGTGAAACGTTAGAGGAAGCTTTAGTAAGGGAAGTAAAAGAAG
AGACAGGTTTAACTGCTGTGGCAGGTGGACTTGTTGCGATTAATGAAAAATTCTTTGAAGAGCCAGGGAATCATGCGCTA
TTATTTACATTTCGAGCGCATGTAGTAAAAGGTGAACTTGTTGCAGCAGATGAAGGAGAAATTTCCGCAATAGAGTGGGT
GGACAGAGCAATTGCAAATGAACGATTCCCATTCTACGATGGAGGATTCGATTCATTATTAGAAGTAGCCATTCCATATA
AGTTTCAACCAGAAACAAAATGA

Upstream 100 bases:

>100_bases
TGGTTAAGTTAAAAAAAAGCTCACAGCTGAGTTAGTGATGAATTAATAGGAAGGGTCGATTCTTAGGAATCGACCCTTTT
AATTGAAGGAGAAAAGCAAC

Downstream 100 bases:

>100_bases
TTAAAAGAAAAAACAGGAGCGTTGTTGCTCCTGTTTTTTCTATTCAATCGTCTTCAGTAATAACTTTTTCAATAGTGGTT
TAATCTTCAAACGTAAATCT

Product: mutT/nudix family protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MQRVDVVYALIHDEETDKILMVHNVEQNVWSLPGGAVEKGETLEEALVREVKEETGLTAVAGGLVAINEKFFEEPGNHAL
LFTFRAHVVKGELVAADEGEISAIEWVDRAIANERFPFYDGGFDSLLEVAIPYKFQPETK

Sequences:

>Translated_140_residues
MQRVDVVYALIHDEETDKILMVHNVEQNVWSLPGGAVEKGETLEEALVREVKEETGLTAVAGGLVAINEKFFEEPGNHAL
LFTFRAHVVKGELVAADEGEISAIEWVDRAIANERFPFYDGGFDSLLEVAIPYKFQPETK
>Mature_140_residues
MQRVDVVYALIHDEETDKILMVHNVEQNVWSLPGGAVEKGETLEEALVREVKEETGLTAVAGGLVAINEKFFEEPGNHAL
LFTFRAHVVKGELVAADEGEISAIEWVDRAIANERFPFYDGGFDSLLEVAIPYKFQPETK

Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 15602; Mature: 15602

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVDVVYALIHDEETDKILMVHNVEQNVWSLPGGAVEKGETLEEALVREVKEETGLTAV
CCCHHEEEEEEECCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEH
AGGLVAINEKFFEEPGNHALLFTFRAHVVKGELVAADEGEISAIEWVDRAIANERFPFYD
HCCEEEECHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCCCCC
GGFDSLLEVAIPYKFQPETK
CCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQRVDVVYALIHDEETDKILMVHNVEQNVWSLPGGAVEKGETLEEALVREVKEETGLTAV
CCCHHEEEEEEECCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEH
AGGLVAINEKFFEEPGNHALLFTFRAHVVKGELVAADEGEISAIEWVDRAIANERFPFYD
HCCEEEECHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCCCCC
GGFDSLLEVAIPYKFQPETK
CCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]