| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447644
Identifier: 46447644
GI number: 46447644
Start: 2389663
End: 2390037
Strand: Reverse
Name: 46447644
Synonym: pc2010
Alternate gene names: NA
Gene position: 2390037-2389663 (Counterclockwise)
Preceding gene: 46447645
Following gene: 46447643
Centisome position: 98.99
GC content: 32.27
Gene sequence:
>375_bases TTGCATCAATTGGCCGAAGGAAGTGGAATCCAGATCCCAGTCGAAGGATCGGATATTAATATACGTTTTTTAGACAACGA TTCTAAATTATCCTTATCTTCCTCTGTTTATCATGGGGGCAATTACATTCCTTCTAGTGTAAGGGATTGTTTATCTCATA AATCCCCATTTTCCCACCTTTCTTCTATATACACATATTTGTTTATTGATGAACAACGCTATCAAATTTATCTCCATTAT TTAGGGCATGCAAATATTCTTAATCTGGAAGAACTAAAAAACTTATTAGAAGAATTCAATGCGATTGCTGAAAAATGGCG CTTTTATTTAGATGAGCATGATAAACATGATTTGATTTATATAAGAGTTAAATAA
Upstream 100 bases:
>100_bases TATATTTTTAATATATAGGTAGTTTAAAATTGGAGTGACCGAAGGAAAATAAATAACTCTTAGGTGGGAAATGTTAATTG AAAAAGATATTCAAAAAATA
Downstream 100 bases:
>100_bases TTAAAAATCAGTCTGCAAAATTTATTATTCTATTTTTTAAATTGAGGAACTTAATTTTAAATGTGAATATTTACTACAGT TAAGTTTATAAGTAACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MHQLAEGSGIQIPVEGSDINIRFLDNDSKLSLSSSVYHGGNYIPSSVRDCLSHKSPFSHLSSIYTYLFIDEQRYQIYLHY LGHANILNLEELKNLLEEFNAIAEKWRFYLDEHDKHDLIYIRVK
Sequences:
>Translated_124_residues MHQLAEGSGIQIPVEGSDINIRFLDNDSKLSLSSSVYHGGNYIPSSVRDCLSHKSPFSHLSSIYTYLFIDEQRYQIYLHY LGHANILNLEELKNLLEEFNAIAEKWRFYLDEHDKHDLIYIRVK >Mature_124_residues MHQLAEGSGIQIPVEGSDINIRFLDNDSKLSLSSSVYHGGNYIPSSVRDCLSHKSPFSHLSSIYTYLFIDEQRYQIYLHY LGHANILNLEELKNLLEEFNAIAEKWRFYLDEHDKHDLIYIRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14487; Mature: 14487
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQLAEGSGIQIPVEGSDINIRFLDNDSKLSLSSSVYHGGNYIPSSVRDCLSHKSPFSHL CCCCCCCCCCEEEECCCCEEEEEECCCCCEEECCCEECCCCCCCHHHHHHHHCCCCHHHH SSIYTYLFIDEQRYQIYLHYLGHANILNLEELKNLLEEFNAIAEKWRFYLDEHDKHDLIY HHHEEEEEEECCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IRVK EEEC >Mature Secondary Structure MHQLAEGSGIQIPVEGSDINIRFLDNDSKLSLSSSVYHGGNYIPSSVRDCLSHKSPFSHL CCCCCCCCCCEEEECCCCEEEEEECCCCCEEECCCEECCCCCCCHHHHHHHHCCCCHHHH SSIYTYLFIDEQRYQIYLHYLGHANILNLEELKNLLEEFNAIAEKWRFYLDEHDKHDLIY HHHEEEEEEECCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IRVK EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA