| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447637
Identifier: 46447637
GI number: 46447637
Start: 2384841
End: 2385404
Strand: Reverse
Name: 46447637
Synonym: pc2003
Alternate gene names: NA
Gene position: 2385404-2384841 (Counterclockwise)
Preceding gene: 46447638
Following gene: 46447636
Centisome position: 98.8
GC content: 39.01
Gene sequence:
>564_bases ATGCCCTATACAATTGTCCTAACGCCGCCTGCAGAACAGGCTCTAAAATATATAGAAGTATCACAAGCTCTTTATAGCGA CTATCAACCCAACTATTTGCTGGCAAGAGATGGAACATCTTCTCCACACATTACTGTTGTACAGTTTGAATGTGAGTCAT CTGATCTCGCATATCAAGTTTGGACCAAAATGTGTGAAAAAATGAGCAAAGAAACCATTATTCCTTTTAGCCCTCCATTT ATTGGAGTAGCTTTTGTTGAAGGAGCTGGTCTTTACGCAAATACTACTTGGATAGAATTGTCCGTTAAAAGAGGAGATAA AAATTCTCCTATTATGAAAGTGCATTATGCTGCTTTAGAAGTGCTTGAGCAGTTCGGTTTGAAGCCTCTAAATGCTTGCG ATAATGACTATAGGCCACACCTAACACTAGCCCGAATTAGTATGCCTGAGCAAATGAAAATCTGGCCTAAAAATCTATGC GAGAATCCAGGTAATTTTAAACTAGAATTTGGCTTGTCGGATGAGAAGTGGCAGTATGCTCAAACCCTTGGATTTTTTCC TTAA
Upstream 100 bases:
>100_bases TTCTCTAAGGCATCAGCAGTGCTTCCCTCTTACGAAGAATTGCCTAGCATTGAGATTTTCCAACAATAATTTAAACATTT AATTACAGGGAAGGGAATCT
Downstream 100 bases:
>100_bases ATTCTACAAAACCTTCCCGATTGACAGAATTGGGTAGATTTTGTAGAATTAAGATATGAGAAATTCAAAATACGCTGAAC AGTTAAAGTCTTTTCAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQVWTKMCEKMSKETIIPFSPPF IGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLC ENPGNFKLEFGLSDEKWQYAQTLGFFP
Sequences:
>Translated_187_residues MPYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQVWTKMCEKMSKETIIPFSPPF IGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLC ENPGNFKLEFGLSDEKWQYAQTLGFFP >Mature_186_residues PYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQVWTKMCEKMSKETIIPFSPPFI GVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALEVLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLCE NPGNFKLEFGLSDEKWQYAQTLGFFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21283; Mature: 21151
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQV CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH WTKMCEKMSKETIIPFSPPFIGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALE HHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEHHHHHH VLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLCENPGNFKLEFGLSDEKWQYA HHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHCCCCCCEEEEECCCCCHHHHH QTLGFFP HHHCCCC >Mature Secondary Structure PYTIVLTPPAEQALKYIEVSQALYSDYQPNYLLARDGTSSPHITVVQFECESSDLAYQV CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH WTKMCEKMSKETIIPFSPPFIGVAFVEGAGLYANTTWIELSVKRGDKNSPIMKVHYAALE HHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEHHHHHH VLEQFGLKPLNACDNDYRPHLTLARISMPEQMKIWPKNLCENPGNFKLEFGLSDEKWQYA HHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHCCCCCCEEEEECCCCCHHHHH QTLGFFP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA