Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447604

Identifier: 46447604

GI number: 46447604

Start: 2348785

End: 2350086

Strand: Direct

Name: 46447604

Synonym: pc1970

Alternate gene names: NA

Gene position: 2348785-2350086 (Clockwise)

Preceding gene: 46447603

Following gene: 46447606

Centisome position: 97.28

GC content: 34.02

Gene sequence:

>1302_bases
ATGAATTCTAGTATCACTGGATCGGATTCTAATCCACTTTTTCACGTAAATGAAGTTTCGGTTGTTAATCCACTTTTTCC
TCCAGTGAACTGTGAAAGTACTAACCCATTTTTTTGTACATCTGATTATTCAAATTCAGATACCGAAAAAGATCTTCATA
TCAAAATGATGGCAGCCTCAGTCACAATGGACCTACATACAAGTCCGATTTGTTTAAAGAGTGGAAAAAAAGTTTATTTG
TTAAGTCAAAAATCCTCAAAAAATGATGAAAATTCACAATCAAATCTTCTTACTCATAAATACAATTATCCTTACTTAGA
TTCTGATTCTGACTCTGAACAAGAAATTTATTTGATTAGCGATCGTATGAACTTTACCGATCGCCATAAATTTTCGCCTG
AGACCCAAATAATGAAGGCTGGTCTTATTTCTTCTACTGCTCAAATTTACTTGGAAGAAAACATACAGACATACAAAGTT
TTTAAACTTAAAAATTTTTCTAATCGTAAAATTTTAATTCTTATCCATGGATTCACAGTAAAATATGAGGATGCGTTAAA
AACATTACGAAGCGTTTCTGATAAAGTTGGGGATAGATATGACGCTGTTATTGGTTATTTATATCCTGCTTGCGCAAAAT
TTTACCAATATCGTCAAGCAAAAGAGAATGGATTGTACGTAGCTGAAGAGCGACTACCGGAGATATTACATTCAATACAA
TCAGTAGCGGAACAAGTAGATATTGTGGCTCATAGCATGGGAACAATAGTTGCCATGCATGCATTGAATCAAAGCGCCAG
CCCAAAAATTGATAATCTTTTCCTTCTTGGAGGAGCAGTTGAAGAAAAAAGTATTTTTGAATGTGATGGTCAAGGATGTA
CCACTTTAAAACGAGCGCTATCTAATGCTAAAAAAATTTATGTGCTTTATTCCTGTAATGATGCGGTCCTGCCATGGCTT
CATATTTTCAATTCTACACAAACTCTTGGACGTCCAGATAAAGTTATACAACAAAAACCTATCGCAAAAAATGTTTGCCT
AATTAATACCTCTTCCGTTGTAAAAGACCATAGTGCTTATTTTCAATGTCAAGAGGTCTTTAAATTTTTTAAGCTGATTA
TATACCATGATGCACACAGTACCAGCATGGTAGGCACTTCTTTTTCCCTTACTTTGAAAGAAGTAACCTCTTCTGAACCC
ATAGTCTGTTCTAAAGGGATAAATAATGCTATTACGGGAGGATTTTCTAAAAAATTTGTTGCCTTTAAATTCGGGAGAAA
AAAAGCAAGCTCCAAAGATTAA

Upstream 100 bases:

>100_bases
TATATTATTAAATTAATAATATATTTTAAATTATCAACTTATTACTTTCAGTTTATTAGTTTATATACAAATGCTTATAA
TAACAAGTTAGGAGGCCTTA

Downstream 100 bases:

>100_bases
GACACAAAAGTAAGCTCTAAAATCAAGGCCAAATTCCAGCCAAATGGGTAATTTTTAACCTTCATTTTAGAGCCAATTAA
CTTATCCTATACACAGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNSSITGSDSNPLFHVNEVSVVNPLFPPVNCESTNPFFCTSDYSNSDTEKDLHIKMMAASVTMDLHTSPICLKSGKKVYL
LSQKSSKNDENSQSNLLTHKYNYPYLDSDSDSEQEIYLISDRMNFTDRHKFSPETQIMKAGLISSTAQIYLEENIQTYKV
FKLKNFSNRKILILIHGFTVKYEDALKTLRSVSDKVGDRYDAVIGYLYPACAKFYQYRQAKENGLYVAEERLPEILHSIQ
SVAEQVDIVAHSMGTIVAMHALNQSASPKIDNLFLLGGAVEEKSIFECDGQGCTTLKRALSNAKKIYVLYSCNDAVLPWL
HIFNSTQTLGRPDKVIQQKPIAKNVCLINTSSVVKDHSAYFQCQEVFKFFKLIIYHDAHSTSMVGTSFSLTLKEVTSSEP
IVCSKGINNAITGGFSKKFVAFKFGRKKASSKD

Sequences:

>Translated_433_residues
MNSSITGSDSNPLFHVNEVSVVNPLFPPVNCESTNPFFCTSDYSNSDTEKDLHIKMMAASVTMDLHTSPICLKSGKKVYL
LSQKSSKNDENSQSNLLTHKYNYPYLDSDSDSEQEIYLISDRMNFTDRHKFSPETQIMKAGLISSTAQIYLEENIQTYKV
FKLKNFSNRKILILIHGFTVKYEDALKTLRSVSDKVGDRYDAVIGYLYPACAKFYQYRQAKENGLYVAEERLPEILHSIQ
SVAEQVDIVAHSMGTIVAMHALNQSASPKIDNLFLLGGAVEEKSIFECDGQGCTTLKRALSNAKKIYVLYSCNDAVLPWL
HIFNSTQTLGRPDKVIQQKPIAKNVCLINTSSVVKDHSAYFQCQEVFKFFKLIIYHDAHSTSMVGTSFSLTLKEVTSSEP
IVCSKGINNAITGGFSKKFVAFKFGRKKASSKD
>Mature_433_residues
MNSSITGSDSNPLFHVNEVSVVNPLFPPVNCESTNPFFCTSDYSNSDTEKDLHIKMMAASVTMDLHTSPICLKSGKKVYL
LSQKSSKNDENSQSNLLTHKYNYPYLDSDSDSEQEIYLISDRMNFTDRHKFSPETQIMKAGLISSTAQIYLEENIQTYKV
FKLKNFSNRKILILIHGFTVKYEDALKTLRSVSDKVGDRYDAVIGYLYPACAKFYQYRQAKENGLYVAEERLPEILHSIQ
SVAEQVDIVAHSMGTIVAMHALNQSASPKIDNLFLLGGAVEEKSIFECDGQGCTTLKRALSNAKKIYVLYSCNDAVLPWL
HIFNSTQTLGRPDKVIQQKPIAKNVCLINTSSVVKDHSAYFQCQEVFKFFKLIIYHDAHSTSMVGTSFSLTLKEVTSSEP
IVCSKGINNAITGGFSKKFVAFKFGRKKASSKD

Specific function: Unknown

COG id: COG4782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48544; Mature: 48544

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSITGSDSNPLFHVNEVSVVNPLFPPVNCESTNPFFCTSDYSNSDTEKDLHIKMMAAS
CCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEE
VTMDLHTSPICLKSGKKVYLLSQKSSKNDENSQSNLLTHKYNYPYLDSDSDSEQEIYLIS
EEEECCCCCEEECCCCEEEEEECCCCCCCCCCHHCCEEEECCCCCCCCCCCCCCEEEEEE
DRMNFTDRHKFSPETQIMKAGLISSTAQIYLEENIQTYKVFKLKNFSNRKILILIHGFTV
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCEE
KYEDALKTLRSVSDKVGDRYDAVIGYLYPACAKFYQYRQAKENGLYVAEERLPEILHSIQ
EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
SVAEQVDIVAHSMGTIVAMHALNQSASPKIDNLFLLGGAVEEKSIFECDGQGCTTLKRAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHH
SNAKKIYVLYSCNDAVLPWLHIFNSTQTLGRPDKVIQQKPIAKNVCLINTSSVVKDHSAY
CCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEECHHHHHHHHHH
FQCQEVFKFFKLIIYHDAHSTSMVGTSFSLTLKEVTSSEPIVCSKGINNAITGGFSKKFV
HHHHHHHHHHHHHHEECCCCCCEECCEEEEEEEHHCCCCCEEEECCCCCHHCCCCCCCEE
AFKFGRKKASSKD
EEEECCCCCCCCC
>Mature Secondary Structure
MNSSITGSDSNPLFHVNEVSVVNPLFPPVNCESTNPFFCTSDYSNSDTEKDLHIKMMAAS
CCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEE
VTMDLHTSPICLKSGKKVYLLSQKSSKNDENSQSNLLTHKYNYPYLDSDSDSEQEIYLIS
EEEECCCCCEEECCCCEEEEEECCCCCCCCCCHHCCEEEECCCCCCCCCCCCCCEEEEEE
DRMNFTDRHKFSPETQIMKAGLISSTAQIYLEENIQTYKVFKLKNFSNRKILILIHGFTV
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCEE
KYEDALKTLRSVSDKVGDRYDAVIGYLYPACAKFYQYRQAKENGLYVAEERLPEILHSIQ
EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
SVAEQVDIVAHSMGTIVAMHALNQSASPKIDNLFLLGGAVEEKSIFECDGQGCTTLKRAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHH
SNAKKIYVLYSCNDAVLPWLHIFNSTQTLGRPDKVIQQKPIAKNVCLINTSSVVKDHSAY
CCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEECHHHHHHHHHH
FQCQEVFKFFKLIIYHDAHSTSMVGTSFSLTLKEVTSSEPIVCSKGINNAITGGFSKKFV
HHHHHHHHHHHHHHEECCCCCCEECCEEEEEEEHHCCCCCEEEECCCCCHHCCCCCCCEE
AFKFGRKKASSKD
EEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA