| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447581
Identifier: 46447581
GI number: 46447581
Start: 2313992
End: 2316535
Strand: Reverse
Name: 46447581
Synonym: pc1947
Alternate gene names: NA
Gene position: 2316535-2313992 (Counterclockwise)
Preceding gene: 46447583
Following gene: 46447578
Centisome position: 95.94
GC content: 36.36
Gene sequence:
>2544_bases ATGGTCAACCCAACCGGACCTTTTCCAAGTCATCCATCTCAAGGACAAAATATCCAACAACCTGCGTCGCAAGCTGCAGA AGGAAAAAAAAGAAAACAAAAAGGAAAGGAAAAAATAGTCGAGGATCCCCAGCAAAAAACTGAGGAAGCAGCTCAGACCG CCATTCAAAATTTATCTACGCCCACATCATCCCCTCCTCATAAGTTGCCTAGGCGAACAAAAGAAGAAGAAGAGGCTTTA GAAGCCGAGGATACTAGTTCTTTGAATAGCAGCAGGAGTTTGCCGACAAGAAAAAGCACTGAAAAAGAGAGTAAAGTTTA TCAAGAAACTTTTCCAGCTGCCATATCTTCTAGGGGAAAAAAGTCCAAAGCAGGGGATAAAATAAACCCACCTAAACTCG AAAAGCGCTCTTCTGGATTGGAGAGCAATAGGGAAATTTATATCAATGCAAAAGGATTTATTGCAGAAGCTGTAGAAATC TTTTCTCAAATAAACAAACCTCTTTGTTTGAAGTTTGGCCAATTCATTCTTAAAATGGATGCCTATAACAATCATGGCGA TAAAAATGAAAATCCCCCTGCAGAATTCATTGACATGCATGCGCAAGCGCGGCTTCTTCTTTTTTTTCACATGGGGGTAG CTTATTCTGGTTTGGAATGTCAAATTGATTGGCTACCAGCCAAAAAACAATTTTACATCGGCTCAGAACAAACAGGCACA GAAGCTTGTCACCATTCTTTATTTGCCGAAGTAAATGATACTTATCTTTATACGCTTAAAAAGTCTTTACTGGAAGCAGT ACGCGCATTGCGTGAAAACCAAAGAGAAATTTCTCTTCCTTTAAAAGAAAGGCTCCTTGAGCTAAATGTCTCTAAAGAAG GACTTCAGAAGACCATTAAAGCCATTTTAGACAATAAAATTCGTGCATTTGATGGAATTGAAAACTTATGGAAAGAGACA TTTACTTCCTCTACAGAGCATCAAGAGTTAAAAAAGTCTTTATTGGAAGCGGTACGAGAATTGCGTGATAACCAAAGAGA AATTCCTATTTCGTTAAAAGAAAAACTCCTTGAGCTAAATGTTTCTGAAGAAGGGCTTCAAAAGACCATTAAAGCAATTT TAGACAATAAAATTCGTGCATCTAATGGAATTGAAAATTTATGGAAGCAGACATTTCCTCTTTCTATAGAGGATCAAGCC CTAGTAACAGAATTAAAAGATGGTTTATTCCAATACATACAAGATAGGAAAAGGCTAACGGAAGAGATGATAGGCAAACT GCAAACAATTGGGATTCCTAGAACTGTTATTAATGCATTACTAAAAAATAAACGATTAAAGAGAGCGCATGTGGATGAAA TGTTTGAAAAGTGGGCGAATCCCTCTTTATGGGCAAACACGAACTTTTATTTTTTAAACCATCATACTTTAATAGCTCCT TCTGCTTTAAATAAAGTGGACGATTTAATTGAAAAAAAAGTGCGCTCCGATGCTATGCAAATCCTTAATGCGATTGCCAC AAAAGAAATTAGCCCTTTGGAAGGCACTCAACAAGTAGGCAGACTCATGATTGCAAACCTAGATGAAAGCCTAAGGGTTA TCCAAGAAAAAATTGCTTTAGTTTCCGCTTTAGAAAAAGAATTGGAGAAGCTGGGCAAACTTTTTAACGGGTTAGAGATT GCACAAACTAGTGCTACCTACACCCCCCTGTACAAAAAGTTAGAAAATTTAAAAGAGGTGCAAAGCACCGTTAATGAACT CATGCGCATTCTCGATGCATTAGCAGATCTTAATCATTCTTCTTCCCATATAGCGATTGTGGATTTTAAAATAGAACAAG CAAGAATGAAAACAGCGCAAAAAACGCTCCATGACTTTAGAACAGAGTTAACAGGATGGATGGATGAAATATTTGAAAAT CGCTATCAACAGTATCGGCAAGTCCCTTTTTTTCAACATCAAAAACAAATCGAGGAACTAAGAATTAATGTAACAGAAAA AGAGAGGGAACAAAAAAAAATTGAGCAAGAATTGAAAGAAAAGGATTTGACTCCAGAAGAAAAGTGGTTGTTGTTCTCAC TAGAAGAGAATCTACCAGAAAATTCATCTTTCCTAAATCTTGAACCTGAAAAAAAGCTAGATTTAGCTGAAAAGTTATCA TATGGCGAAGCTAAACGTTATGAAGCTTATAAAAGTGTGATAAAAAAAACCGGCTTACAAAAGGATTTAGAGGAAATAAA GAGAATAATTCAGCAAAATCGAGATTTAATGCAGGAACTAGGAAAAGAAAAAGAGCCTGAAGATGCTTTTTTAAGAAAAA ACTATACAAACACTTCAAAAAAAATAATTGAATGGTCAATAAACTCCCAGTTTAGATTAATTCATTATCCTGTGTCTAGC TCCACGCTTTCTTTTGTCAAAGATTTATTAAACCTACAATCTAGGGCTACTGCTCAGCTTATCCAGGATTTGGAACAAGC TGATCCTTTTACTTATGAAGAGGAAGCTTTAAAACAAGCCTTGATTAAACGGTCGACTGAATAG
Upstream 100 bases:
>100_bases CAGATCACTCCCATTTTCCCGCTATTAAAAACAAATTTTTATCTTTAGTTTGCATTGGCATACAAATTGCACCTTAGGAG GAAAAAAGGGGGGGTTAGCC
Downstream 100 bases:
>100_bases GCTAAATTTCAAAGCTTAAGGGGGGAAATGGGAGAGAGAGGCCTTAGCAAAGTCCCAAACATCTAACTCCCCTCCTTTAT CGTAGCAAGCCAAACGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MVNPTGPFPSHPSQGQNIQQPASQAAEGKKRKQKGKEKIVEDPQQKTEEAAQTAIQNLSTPTSSPPHKLPRRTKEEEEAL EAEDTSSLNSSRSLPTRKSTEKESKVYQETFPAAISSRGKKSKAGDKINPPKLEKRSSGLESNREIYINAKGFIAEAVEI FSQINKPLCLKFGQFILKMDAYNNHGDKNENPPAEFIDMHAQARLLLFFHMGVAYSGLECQIDWLPAKKQFYIGSEQTGT EACHHSLFAEVNDTYLYTLKKSLLEAVRALRENQREISLPLKERLLELNVSKEGLQKTIKAILDNKIRAFDGIENLWKET FTSSTEHQELKKSLLEAVRELRDNQREIPISLKEKLLELNVSEEGLQKTIKAILDNKIRASNGIENLWKQTFPLSIEDQA LVTELKDGLFQYIQDRKRLTEEMIGKLQTIGIPRTVINALLKNKRLKRAHVDEMFEKWANPSLWANTNFYFLNHHTLIAP SALNKVDDLIEKKVRSDAMQILNAIATKEISPLEGTQQVGRLMIANLDESLRVIQEKIALVSALEKELEKLGKLFNGLEI AQTSATYTPLYKKLENLKEVQSTVNELMRILDALADLNHSSSHIAIVDFKIEQARMKTAQKTLHDFRTELTGWMDEIFEN RYQQYRQVPFFQHQKQIEELRINVTEKEREQKKIEQELKEKDLTPEEKWLLFSLEENLPENSSFLNLEPEKKLDLAEKLS YGEAKRYEAYKSVIKKTGLQKDLEEIKRIIQQNRDLMQELGKEKEPEDAFLRKNYTNTSKKIIEWSINSQFRLIHYPVSS STLSFVKDLLNLQSRATAQLIQDLEQADPFTYEEEALKQALIKRSTE
Sequences:
>Translated_847_residues MVNPTGPFPSHPSQGQNIQQPASQAAEGKKRKQKGKEKIVEDPQQKTEEAAQTAIQNLSTPTSSPPHKLPRRTKEEEEAL EAEDTSSLNSSRSLPTRKSTEKESKVYQETFPAAISSRGKKSKAGDKINPPKLEKRSSGLESNREIYINAKGFIAEAVEI FSQINKPLCLKFGQFILKMDAYNNHGDKNENPPAEFIDMHAQARLLLFFHMGVAYSGLECQIDWLPAKKQFYIGSEQTGT EACHHSLFAEVNDTYLYTLKKSLLEAVRALRENQREISLPLKERLLELNVSKEGLQKTIKAILDNKIRAFDGIENLWKET FTSSTEHQELKKSLLEAVRELRDNQREIPISLKEKLLELNVSEEGLQKTIKAILDNKIRASNGIENLWKQTFPLSIEDQA LVTELKDGLFQYIQDRKRLTEEMIGKLQTIGIPRTVINALLKNKRLKRAHVDEMFEKWANPSLWANTNFYFLNHHTLIAP SALNKVDDLIEKKVRSDAMQILNAIATKEISPLEGTQQVGRLMIANLDESLRVIQEKIALVSALEKELEKLGKLFNGLEI AQTSATYTPLYKKLENLKEVQSTVNELMRILDALADLNHSSSHIAIVDFKIEQARMKTAQKTLHDFRTELTGWMDEIFEN RYQQYRQVPFFQHQKQIEELRINVTEKEREQKKIEQELKEKDLTPEEKWLLFSLEENLPENSSFLNLEPEKKLDLAEKLS YGEAKRYEAYKSVIKKTGLQKDLEEIKRIIQQNRDLMQELGKEKEPEDAFLRKNYTNTSKKIIEWSINSQFRLIHYPVSS STLSFVKDLLNLQSRATAQLIQDLEQADPFTYEEEALKQALIKRSTE >Mature_847_residues MVNPTGPFPSHPSQGQNIQQPASQAAEGKKRKQKGKEKIVEDPQQKTEEAAQTAIQNLSTPTSSPPHKLPRRTKEEEEAL EAEDTSSLNSSRSLPTRKSTEKESKVYQETFPAAISSRGKKSKAGDKINPPKLEKRSSGLESNREIYINAKGFIAEAVEI FSQINKPLCLKFGQFILKMDAYNNHGDKNENPPAEFIDMHAQARLLLFFHMGVAYSGLECQIDWLPAKKQFYIGSEQTGT EACHHSLFAEVNDTYLYTLKKSLLEAVRALRENQREISLPLKERLLELNVSKEGLQKTIKAILDNKIRAFDGIENLWKET FTSSTEHQELKKSLLEAVRELRDNQREIPISLKEKLLELNVSEEGLQKTIKAILDNKIRASNGIENLWKQTFPLSIEDQA LVTELKDGLFQYIQDRKRLTEEMIGKLQTIGIPRTVINALLKNKRLKRAHVDEMFEKWANPSLWANTNFYFLNHHTLIAP SALNKVDDLIEKKVRSDAMQILNAIATKEISPLEGTQQVGRLMIANLDESLRVIQEKIALVSALEKELEKLGKLFNGLEI AQTSATYTPLYKKLENLKEVQSTVNELMRILDALADLNHSSSHIAIVDFKIEQARMKTAQKTLHDFRTELTGWMDEIFEN RYQQYRQVPFFQHQKQIEELRINVTEKEREQKKIEQELKEKDLTPEEKWLLFSLEENLPENSSFLNLEPEKKLDLAEKLS YGEAKRYEAYKSVIKKTGLQKDLEEIKRIIQQNRDLMQELGKEKEPEDAFLRKNYTNTSKKIIEWSINSQFRLIHYPVSS STLSFVKDLLNLQSRATAQLIQDLEQADPFTYEEEALKQALIKRSTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97401; Mature: 97401
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNPTGPFPSHPSQGQNIQQPASQAAEGKKRKQKGKEKIVEDPQQKTEEAAQTAIQNLST CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PTSSPPHKLPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTEKESKVYQETFPAAISSRGK CCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC KSKAGDKINPPKLEKRSSGLESNREIYINAKGFIAEAVEIFSQINKPLCLKFGQFILKMD CCCCCCCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AYNNHGDKNENPPAEFIDMHAQARLLLFFHMGVAYSGLECQIDWLPAKKQFYIGSEQTGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCHH EACHHSLFAEVNDTYLYTLKKSLLEAVRALRENQREISLPLKERLLELNVSKEGLQKTIK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHCCCHHHHHHHHH AILDNKIRAFDGIENLWKETFTSSTEHQELKKSLLEAVRELRDNQREIPISLKEKLLELN HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC VSEEGLQKTIKAILDNKIRASNGIENLWKQTFPLSIEDQALVTELKDGLFQYIQDRKRLT CCHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EEMIGKLQTIGIPRTVINALLKNKRLKRAHVDEMFEKWANPSLWANTNFYFLNHHTLIAP HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCEECC SALNKVDDLIEKKVRSDAMQILNAIATKEISPLEGTQQVGRLMIANLDESLRVIQEKIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH VSALEKELEKLGKLFNGLEIAQTSATYTPLYKKLENLKEVQSTVNELMRILDALADLNHS HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSHIAIVDFKIEQARMKTAQKTLHDFRTELTGWMDEIFENRYQQYRQVPFFQHQKQIEEL CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RINVTEKEREQKKIEQELKEKDLTPEEKWLLFSLEENLPENSSFLNLEPEKKLDLAEKLS HCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHCCCCCCCEECCCCHHHHHHHHHHC YGEAKRYEAYKSVIKKTGLQKDLEEIKRIIQQNRDLMQELGKEKEPEDAFLRKNYTNTSK CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHH KIIEWSINSQFRLIHYPVSSSTLSFVKDLLNLQSRATAQLIQDLEQADPFTYEEEALKQA HHEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LIKRSTE HHHCCCC >Mature Secondary Structure MVNPTGPFPSHPSQGQNIQQPASQAAEGKKRKQKGKEKIVEDPQQKTEEAAQTAIQNLST CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PTSSPPHKLPRRTKEEEEALEAEDTSSLNSSRSLPTRKSTEKESKVYQETFPAAISSRGK CCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC KSKAGDKINPPKLEKRSSGLESNREIYINAKGFIAEAVEIFSQINKPLCLKFGQFILKMD CCCCCCCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AYNNHGDKNENPPAEFIDMHAQARLLLFFHMGVAYSGLECQIDWLPAKKQFYIGSEQTGT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCHH EACHHSLFAEVNDTYLYTLKKSLLEAVRALRENQREISLPLKERLLELNVSKEGLQKTIK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHCCCHHHHHHHHH AILDNKIRAFDGIENLWKETFTSSTEHQELKKSLLEAVRELRDNQREIPISLKEKLLELN HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC VSEEGLQKTIKAILDNKIRASNGIENLWKQTFPLSIEDQALVTELKDGLFQYIQDRKRLT CCHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EEMIGKLQTIGIPRTVINALLKNKRLKRAHVDEMFEKWANPSLWANTNFYFLNHHTLIAP HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCEECC SALNKVDDLIEKKVRSDAMQILNAIATKEISPLEGTQQVGRLMIANLDESLRVIQEKIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH VSALEKELEKLGKLFNGLEIAQTSATYTPLYKKLENLKEVQSTVNELMRILDALADLNHS HHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSHIAIVDFKIEQARMKTAQKTLHDFRTELTGWMDEIFENRYQQYRQVPFFQHQKQIEEL CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RINVTEKEREQKKIEQELKEKDLTPEEKWLLFSLEENLPENSSFLNLEPEKKLDLAEKLS HCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHCCCCCCCEECCCCHHHHHHHHHHC YGEAKRYEAYKSVIKKTGLQKDLEEIKRIIQQNRDLMQELGKEKEPEDAFLRKNYTNTSK CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHH KIIEWSINSQFRLIHYPVSSSTLSFVKDLLNLQSRATAQLIQDLEQADPFTYEEEALKQA HHEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LIKRSTE HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA