Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447579

Identifier: 46447579

GI number: 46447579

Start: 2311956

End: 2312249

Strand: Direct

Name: 46447579

Synonym: pc1945

Alternate gene names: NA

Gene position: 2311956-2312249 (Clockwise)

Preceding gene: 46447575

Following gene: 46447580

Centisome position: 95.75

GC content: 35.03

Gene sequence:

>294_bases
ATGTACGCACTGCGGATTAGATTTGGTAAAAAAAAATGGTGCTACAAGGCAAGAAAAGCAAAATCTCTCTTAACAAACTG
GTTATCATGGGGTTCTGGGCTAGGAAGGATGATTAATATTTGTGAACAACAAGGAATACCTGTTCCCAAATTTGAAGAGT
TAGGAAATTTTTTTCGCACAACTTCATATCACGGTGTTAGTAACTTTACCAAAGTTGAACAGTGGCAAAGACAAATTATT
GAGTACTTAAAACTCCATAAAGAAATACTACCTAAGAAAGCCCAAACAATTTGA

Upstream 100 bases:

>100_bases
TGTCGAATATGCCAAGACCGAAAAATTAAATGTTGTTAGAGAAATTCAATTGTAATTTGATAGATTAATTGTTCTAATTC
GAGCAGAGAAGAGCAATGAA

Downstream 100 bases:

>100_bases
AATGTTAGTTCAAATACAACAAGCTCGAGATCAAAAAAGAAATTTAGTTTAAGGAGTTAAAAAGCTATATAGATTGCTAT
TGCATTCAAGAAAGAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRTTSYHGVSNFTKVEQWQRQII
EYLKLHKEILPKKAQTI

Sequences:

>Translated_97_residues
MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRTTSYHGVSNFTKVEQWQRQII
EYLKLHKEILPKKAQTI
>Mature_97_residues
MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRTTSYHGVSNFTKVEQWQRQII
EYLKLHKEILPKKAQTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11507; Mature: 11507

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRT
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
TSYHGVSNFTKVEQWQRQIIEYLKLHKEILPKKAQTI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRT
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
TSYHGVSNFTKVEQWQRQIIEYLKLHKEILPKKAQTI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA