Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447560

Identifier: 46447560

GI number: 46447560

Start: 2292758

End: 2295043

Strand: Direct

Name: 46447560

Synonym: pc1926

Alternate gene names: NA

Gene position: 2292758-2295043 (Clockwise)

Preceding gene: 46447559

Following gene: 46447561

Centisome position: 94.96

GC content: 40.16

Gene sequence:

>2286_bases
ATGGATGAAAATAATCCCTTAGTCAATCCTTTGGCTAATACAGAGGAAACTGGTGCGTCAACGATTCCAGCTCCCGCTCT
TGCACCTTCATCTGAAGAAATTCAACTAAGCTTTCAAGAGGGAACTTCTCTGACTATTTCTCACTCTCAGCTAGCTTTTT
TAAGGGACAAATCGCCCTATTTTAAGAATCTGTGGTCGGGGCAATTTCAAGAAACCCTGCAACACCCTCTCGCTTTGACA
CAAAAAGAGTTTGCGCTTTTGCTCAATTGCTTAACGAATCCTAAGTTTGAAATTCCCTTGGAAGAGATCACCTCTGCCAT
GCAGCTAGCAGATTCTTATGAATTGACAGAAGTGATGAAAAATTTAGAAGAGCAGTTGATTGATGGATACAAAACACAAA
GATTTGAACCCTTTAACTCCACTAAAGAGAGTTTAGTCGAATTCAAAGAACTTTTAAATTTTGCACATCTTTACCAATTA
AATACATTGAAGAACTATTTAGAGTTCACCGTTGTGAGCGAATTGTTAAACCAGACTTCTCAGCTAGCGGAATTTGAAAG
AATTATAAATCACTTCTCAAAAAAGATAGAGAGACTTAATTTTTCAAATCAGGTTTATTTAACAAATGCCCATCTTTTAG
CATTAAAAGATTGTAAGAATTTAAAAGCACTTCATTTAGAGGCATGTCAGGCTCTCACTGATGACGGTTTGGAGCATTTG
ACGCTCTTAACGGCTTTGCAGCATCTAAATTTAAGCAGATGCAAAAATCTCACCGATGCAGGATTGGCGCATTTAACACC
CTTAACGGGCTTACAGTATCTTGATTTAAGCCATTGCAATAAATTTACCGACGCAGGATTAGCGTATTTGGAAATTTTAA
CAGCTTTGCAGCATCTTGACCTAAGGGGATGTGACAAAATCACGGATGCTGGATTATCGCATTTGACACCCTTGGTGGCC
TTGCAATATCTAAGTCTAAGCCAATGTTGGAATCTCACTGATGCAGGATTAATTCATTTGAAACCCTTGACGGCTTTGCA
GTATCTAAATCTAAGCAGATGCAATAAACTCACTGATGCTGGATTAGAGCATTTGGCGCTCTTAACGTCTTTGCAGCATC
TAAATTTAAGCAGTTGCAAAAAACTCACCGATGCGGGATTAGCGCATCTGACACCCTTAATGGCTTTGCAGCATCTAGAT
CTAAGCATATGCAATAAACTCACTGATAGGGGATTGACGCATTTGAACCCCTTGACGGCTTTGCAGTATCTAAATCTAAG
CCAATGTGATAATATCACTAATGCTGGATTAGAGCATTTGATACCCTTAACGGCTTTGCAGTATCTAAATCTAAGCCAAT
GTGAAAAACTCACTGATGCTGGATTAGAGCATTTGACACCCTTAACGGCTTTGCAACAACTAGATCTAAGCTGGTGCTAT
AAACTCACCGATGCTGGATTTGCCCATCTGACACCTTTAACGGGCTTACAGTATCTTGATTTAAGCCATTGCAATAAACT
TACCGATGCAGGATTAGCCCATTTGACACCCTTAACGGCTTTGCAGTATTTAGATCTAAGCAATTGTATAAAACTCACTG
ACGATGGATTAGCGCATTTGACACCCTTAATGGCTTTGCAGCATCTAAATCTAAGCAGTTGCTATAAACTCACCGATGCT
GGATTTGCCCATCTGTCACCCTTAACGGCTTTGCAGCGTCTAGATTTGAGCTACTGTCAGAATCTCACGGATGCAGAATT
AGCCCATTTAACACCCTTAACAGCTTTACAACGTCTAGATTTGCGCTACTGTGAGAATCTCACGGATGCAGGATTAGTCC
ATTTGAAACTCTTAACGGATTTGCAGTATCTAAATCTGAGAGGATGTGGGTATCTTACTGACGCTGGATTAGCCCATTTG
ACAACTTTATCAGGTTTACAGCATCTAGATTTAAGCAGTTGTGAGAAACTCACGGATGCAGGATTAGTCCATTTGAAACT
CTTAACGGATTTGCAGTATCTAAATCTAAGCAGGTGTGAAAATCTCACTGATGAAGGATTAGCCCTTTTGACACCTTTAA
CGGCTTTGCAGCATCTGAAACTACGCTACTGTATAAATCTCACCGATGCAGGATTAGCCCATTTGACACCCTTAACGGGA
TTGCAGCGTCTAGATTTAAGCCAATGCTGGAACCTTACTGATGCAGGATTAATTCATTTGAAACTCTTAACGGCTTTGCA
GCATCTAAATCTGAGCGATACTAACATTTCACCGATGCAGGATTAG

Upstream 100 bases:

>100_bases
GGTTATTTTGAATATTTCTAATTTTGGGTTTAATCCTAGTTATCTTATCCATACAACGGCTCCTTCTTACTCTCAATCTC
AAGAAATTAATGACCCTGTT

Downstream 100 bases:

>100_bases
CGCATTTAACACCCTTAACGGCTTTGCAGCATCTAGATCTAAGCTTTTGTAATAATCTCACTGGGGATGGATTAGCCCAT
TTGACACCCTTAACGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MDENNPLVNPLANTEETGASTIPAPALAPSSEEIQLSFQEGTSLTISHSQLAFLRDKSPYFKNLWSGQFQETLQHPLALT
QKEFALLLNCLTNPKFEIPLEEITSAMQLADSYELTEVMKNLEEQLIDGYKTQRFEPFNSTKESLVEFKELLNFAHLYQL
NTLKNYLEFTVVSELLNQTSQLAEFERIINHFSKKIERLNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHL
TLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDKITDAGLSHLTPLVA
LQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLD
LSICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCY
KLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMALQHLNLSSCYKLTDA
GFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHL
TTLSGLQHLDLSSCEKLTDAGLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTG
LQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNISPMQD

Sequences:

>Translated_761_residues
MDENNPLVNPLANTEETGASTIPAPALAPSSEEIQLSFQEGTSLTISHSQLAFLRDKSPYFKNLWSGQFQETLQHPLALT
QKEFALLLNCLTNPKFEIPLEEITSAMQLADSYELTEVMKNLEEQLIDGYKTQRFEPFNSTKESLVEFKELLNFAHLYQL
NTLKNYLEFTVVSELLNQTSQLAEFERIINHFSKKIERLNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHL
TLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDKITDAGLSHLTPLVA
LQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLD
LSICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCY
KLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMALQHLNLSSCYKLTDA
GFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHL
TTLSGLQHLDLSSCEKLTDAGLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTG
LQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNISPMQD
>Mature_761_residues
MDENNPLVNPLANTEETGASTIPAPALAPSSEEIQLSFQEGTSLTISHSQLAFLRDKSPYFKNLWSGQFQETLQHPLALT
QKEFALLLNCLTNPKFEIPLEEITSAMQLADSYELTEVMKNLEEQLIDGYKTQRFEPFNSTKESLVEFKELLNFAHLYQL
NTLKNYLEFTVVSELLNQTSQLAEFERIINHFSKKIERLNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHL
TLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLRGCDKITDAGLSHLTPLVA
LQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLD
LSICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCY
KLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHLTPLMALQHLNLSSCYKLTDA
GFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHL
TTLSGLQHLDLSSCEKLTDAGLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTG
LQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNISPMQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=303, Percent_Identity=36.963696369637, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI161333852, Length=557, Percent_Identity=26.032315978456, Blast_Score=151, Evalue=3e-36,
Organism=Homo sapiens, GI284447308, Length=348, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=6e-31,
Organism=Homo sapiens, GI161333854, Length=488, Percent_Identity=26.0245901639344, Blast_Score=133, Evalue=7e-31,
Organism=Homo sapiens, GI6912466, Length=296, Percent_Identity=32.4324324324324, Blast_Score=123, Evalue=6e-28,
Organism=Homo sapiens, GI27734755, Length=337, Percent_Identity=32.0474777448071, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI296531375, Length=305, Percent_Identity=32.1311475409836, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI284447314, Length=241, Percent_Identity=34.8547717842324, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI289666746, Length=300, Percent_Identity=33, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI255683361, Length=315, Percent_Identity=25.7142857142857, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI16306588, Length=278, Percent_Identity=30.9352517985612, Blast_Score=68, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25151694, Length=331, Percent_Identity=30.2114803625378, Blast_Score=113, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI25151696, Length=331, Percent_Identity=30.2114803625378, Blast_Score=113, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6322549, Length=353, Percent_Identity=27.4787535410765, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17647819, Length=302, Percent_Identity=36.7549668874172, Blast_Score=154, Evalue=2e-37,
Organism=Drosophila melanogaster, GI21357913, Length=279, Percent_Identity=33.6917562724014, Blast_Score=112, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24662818, Length=276, Percent_Identity=36.231884057971, Blast_Score=109, Evalue=7e-24,
Organism=Drosophila melanogaster, GI161076545, Length=314, Percent_Identity=31.8471337579618, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24652783, Length=314, Percent_Identity=31.5286624203822, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI161076549, Length=314, Percent_Identity=32.1656050955414, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI161076547, Length=314, Percent_Identity=31.8471337579618, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19921840, Length=383, Percent_Identity=30.2872062663185, Blast_Score=89, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24646754, Length=279, Percent_Identity=29.3906810035842, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84544; Mature: 84544

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENNPLVNPLANTEETGASTIPAPALAPSSEEIQLSFQEGTSLTISHSQLAFLRDKSPY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHCCCCCH
FKNLWSGQFQETLQHPLALTQKEFALLLNCLTNPKFEIPLEEITSAMQLADSYELTEVMK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NLEEQLIDGYKTQRFEPFNSTKESLVEFKELLNFAHLYQLNTLKNYLEFTVVSELLNQTS
HHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLAEFERIINHFSKKIERLNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHL
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHHHCCHHHHHHHHHHHHHHCHHHHH
TLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLD
HHHHHHHHCCHHHHCCCHHCCHHHHCHHCCCHHHCHHHCCHHHHHHHHHHHHHHHHHHCC
LRGCDKITDAGLSHLTPLVALQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDA
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCHHHHHHHHHH
GLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLSICNKLTDRGLTHLNPLTA
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHH
LQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCY
HHHCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHL
HHHCCCCHHCCHHCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHH
TPLMALQHLNLSSCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLD
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHH
LRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCEKLTDA
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHC
GLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTG
CHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHCHHHH
LQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNISPMQD
HHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDENNPLVNPLANTEETGASTIPAPALAPSSEEIQLSFQEGTSLTISHSQLAFLRDKSPY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHHHHHHHCCCCCH
FKNLWSGQFQETLQHPLALTQKEFALLLNCLTNPKFEIPLEEITSAMQLADSYELTEVMK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NLEEQLIDGYKTQRFEPFNSTKESLVEFKELLNFAHLYQLNTLKNYLEFTVVSELLNQTS
HHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLAEFERIINHFSKKIERLNFSNQVYLTNAHLLALKDCKNLKALHLEACQALTDDGLEHL
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEHHHCCHHHHHHHHHHHHHHCHHHHH
TLLTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLD
HHHHHHHHCCHHHHCCCHHCCHHHHCHHCCCHHHCHHHCCHHHHHHHHHHHHHHHHHHCC
LRGCDKITDAGLSHLTPLVALQYLSLSQCWNLTDAGLIHLKPLTALQYLNLSRCNKLTDA
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCHHHHHHHHHH
GLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLSICNKLTDRGLTHLNPLTA
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHH
LQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGLEHLTPLTALQQLDLSWCY
HHHCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KLTDAGFAHLTPLTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNCIKLTDDGLAHL
HHHCCCCHHCCHHCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHH
TPLMALQHLNLSSCYKLTDAGFAHLSPLTALQRLDLSYCQNLTDAELAHLTPLTALQRLD
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHH
LRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCEKLTDA
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHC
GLVHLKLLTDLQYLNLSRCENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTG
CHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHCHHHH
LQRLDLSQCWNLTDAGLIHLKLLTALQHLNLSDTNISPMQD
HHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA