| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447542
Identifier: 46447542
GI number: 46447542
Start: 2269804
End: 2269995
Strand: Direct
Name: 46447542
Synonym: pc1908
Alternate gene names: NA
Gene position: 2269804-2269995 (Clockwise)
Preceding gene: 46447541
Following gene: 46447543
Centisome position: 94.01
GC content: 30.73
Gene sequence:
>192_bases GTGTTTTATCTCTTCCACTTAAAAAATATCCTGATCAATTTGATCATACATTTATTAGTGATTCAGAGCGGGAAAAATTC AACGAGGAAAACGGTTAAATTATGTCCAAACATGAAATTATTTCAAAGAGATGCCTTGCATTCAAAATTATTATCGTATT CCTCTACAGCTATAGTAAACCATCTTCATTGA
Upstream 100 bases:
>100_bases ATTTTTAAAAAATACTTTGGGACATGTATTTTTAGCGGAAGCCGAGTTAGTGGACGAACTTCTTACAATTCGAGGGCTTA AAAAAAGTGGGTGAAATTAG
Downstream 100 bases:
>100_bases TAATAAGAAGCTGTACTGACTTCATACTTGCGACAAACTTCTACAAGAGGTATTTCTGAGTCGACTTCTTTTAGGATTTT AATAATTTGTTCTTCTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MFYLFHLKNILINLIIHLLVIQSGKNSTRKTVKLCPNMKLFQRDALHSKLLSYSSTAIVNHLH
Sequences:
>Translated_63_residues MFYLFHLKNILINLIIHLLVIQSGKNSTRKTVKLCPNMKLFQRDALHSKLLSYSSTAIVNHLH >Mature_63_residues MFYLFHLKNILINLIIHLLVIQSGKNSTRKTVKLCPNMKLFQRDALHSKLLSYSSTAIVNHLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7317; Mature: 7317
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYLFHLKNILINLIIHLLVIQSGKNSTRKTVKLCPNMKLFQRDALHSKLLSYSSTAIVN CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH HLH CCC >Mature Secondary Structure MFYLFHLKNILINLIIHLLVIQSGKNSTRKTVKLCPNMKLFQRDALHSKLLSYSSTAIVN CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH HLH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA