| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is tolA
Identifier: 46447483
GI number: 46447483
Start: 2209164
End: 2210231
Strand: Direct
Name: tolA
Synonym: pc1849
Alternate gene names: NA
Gene position: 2209164-2210231 (Clockwise)
Preceding gene: 46447482
Following gene: 46447484
Centisome position: 91.5
GC content: 34.55
Gene sequence:
>1068_bases TTGCTTATGCACAATGATCCAACTTCTCTCTTTTTTCAAACATATACCCAGCAAAAAGCTTGGTGGTTGATTGCTATTGC GGTCATATTTTTTCATTTACTGATTTTATTAGTTAATTCTACATGGTCAATTTCACCAGAAAAACAACAAACGACGAAAT TAGTAGTCTCGACACTTATCTTGCAACCTTCCGCTCCTCCCTCTTCTATAAAAACTTTGCTTACACAAGAGATTGATAAG AGTTTAGTCTCATCCACTTCGTTACCTTTAACACCAGAAAATCCCTTACCTGCTAAGACAAAACCACAAGACTCTTCTAA ATCACATAAAGTGACTGAAAAAAAATCTGAACTTAAGTTAGAATCTAAACCCTCTCCAAAAACTGAACCAAAAAAAAATA CAGCCTCTTCACCAAAAATAAAAAAAACTGACCCCCCACAAAAAACCACTGAACAAAAACAAGCAGAGAAGAAAAAAGTA AAAGCGACTCCAGCATCAACATTTGAGAAAGAAAAACAAAAAAAAGAGGCTGTTAAAAAAGAAAATATTGCTAAGGAAAC TCTTGCCAAAGATGCTGACAAGCGACTTAAGCAAGAATTAGCAGCCTCGCAAGAGGCTGCTCTAAAAAAAGAGCAACAGC TCTTAGCTAAAGCTAAAGAAAATCTAGCCAAAATAGGAGAGGCAAAACAAAAATCCAATTCTACCACGCTAACTAAAATT GGAGAATCCCCTATTCTAAAACAGATTCAAAATCTACAAATTGACACTTTACCTCAAGGAAATAGTGTTCAAGGAGAGTT AAATGGAAGGGATAGCAGTTATCGAGAAGAAATTGCTCAACGATTAAAACTTTTTCTAAAATTACCCGATTACGGATCTG TACAAGTTAAATTGACAATCGACCGAACAGGCAAAATTGCTCAAATTAGCATTGTAAAAAGTGAAAGTTCAAAAAATCAG CAGTACATAGAAAAAAACCTTCCCACGATTTATTTTCCAGCTTTCGGAACTCGATTTGAAGGACTTTCACAATACACTTT TTTAGTTACGTTAAATAACGATTATTAA
Upstream 100 bases:
>100_bases AAAAGCCTGTTTCGGGACATACCAACTAGTCAAGAATGCTGCAGAAGAAGCAGGATTTTCAAAAGTAGACATTATTTTAA AACCTGCTTAAAGCAACCCA
Downstream 100 bases:
>100_bases CCTGGATTACAAGTTTATTCACTAAAAAATCTATTAGATTATTAAAAACCCAAGAAATTTTATGTATGCATTTTTTTTTA AAACATCTAACCATTGGATA
Product: putative tolA protein of Tol-Pal system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLMHNDPTSLFFQTYTQQKAWWLIAIAVIFFHLLILLVNSTWSISPEKQQTTKLVVSTLILQPSAPPSSIKTLLTQEIDK SLVSSTSLPLTPENPLPAKTKPQDSSKSHKVTEKKSELKLESKPSPKTEPKKNTASSPKIKKTDPPQKTTEQKQAEKKKV KATPASTFEKEKQKKEAVKKENIAKETLAKDADKRLKQELAASQEAALKKEQQLLAKAKENLAKIGEAKQKSNSTTLTKI GESPILKQIQNLQIDTLPQGNSVQGELNGRDSSYREEIAQRLKLFLKLPDYGSVQVKLTIDRTGKIAQISIVKSESSKNQ QYIEKNLPTIYFPAFGTRFEGLSQYTFLVTLNNDY
Sequences:
>Translated_355_residues MLMHNDPTSLFFQTYTQQKAWWLIAIAVIFFHLLILLVNSTWSISPEKQQTTKLVVSTLILQPSAPPSSIKTLLTQEIDK SLVSSTSLPLTPENPLPAKTKPQDSSKSHKVTEKKSELKLESKPSPKTEPKKNTASSPKIKKTDPPQKTTEQKQAEKKKV KATPASTFEKEKQKKEAVKKENIAKETLAKDADKRLKQELAASQEAALKKEQQLLAKAKENLAKIGEAKQKSNSTTLTKI GESPILKQIQNLQIDTLPQGNSVQGELNGRDSSYREEIAQRLKLFLKLPDYGSVQVKLTIDRTGKIAQISIVKSESSKNQ QYIEKNLPTIYFPAFGTRFEGLSQYTFLVTLNNDY >Mature_355_residues MLMHNDPTSLFFQTYTQQKAWWLIAIAVIFFHLLILLVNSTWSISPEKQQTTKLVVSTLILQPSAPPSSIKTLLTQEIDK SLVSSTSLPLTPENPLPAKTKPQDSSKSHKVTEKKSELKLESKPSPKTEPKKNTASSPKIKKTDPPQKTTEQKQAEKKKV KATPASTFEKEKQKKEAVKKENIAKETLAKDADKRLKQELAASQEAALKKEQQLLAKAKENLAKIGEAKQKSNSTTLTKI GESPILKQIQNLQIDTLPQGNSVQGELNGRDSSYREEIAQRLKLFLKLPDYGSVQVKLTIDRTGKIAQISIVKSESSKNQ QYIEKNLPTIYFPAFGTRFEGLSQYTFLVTLNNDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39789; Mature: 39789
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMHNDPTSLFFQTYTQQKAWWLIAIAVIFFHLLILLVNSTWSISPEKQQTTKLVVSTLI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LQPSAPPSSIKTLLTQEIDKSLVSSTSLPLTPENPLPAKTKPQDSSKSHKVTEKKSELKL HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEE ESKPSPKTEPKKNTASSPKIKKTDPPQKTTEQKQAEKKKVKATPASTFEKEKQKKEAVKK CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ENIAKETLAKDADKRLKQELAASQEAALKKEQQLLAKAKENLAKIGEAKQKSNSTTLTKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC GESPILKQIQNLQIDTLPQGNSVQGELNGRDSSYREEIAQRLKLFLKLPDYGSVQVKLTI CCCHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE DRTGKIAQISIVKSESSKNQQYIEKNLPTIYFPAFGTRFEGLSQYTFLVTLNNDY CCCCCEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MLMHNDPTSLFFQTYTQQKAWWLIAIAVIFFHLLILLVNSTWSISPEKQQTTKLVVSTLI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH LQPSAPPSSIKTLLTQEIDKSLVSSTSLPLTPENPLPAKTKPQDSSKSHKVTEKKSELKL HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEE ESKPSPKTEPKKNTASSPKIKKTDPPQKTTEQKQAEKKKVKATPASTFEKEKQKKEAVKK CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ENIAKETLAKDADKRLKQELAASQEAALKKEQQLLAKAKENLAKIGEAKQKSNSTTLTKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC GESPILKQIQNLQIDTLPQGNSVQGELNGRDSSYREEIAQRLKLFLKLPDYGSVQVKLTI CCCHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEE DRTGKIAQISIVKSESSKNQQYIEKNLPTIYFPAFGTRFEGLSQYTFLVTLNNDY CCCCCEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA