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The map label for this gene is shsP [H]

Identifier: 46447438

GI number: 46447438

Start: 2156942

End: 2157388

Strand: Direct

Name: shsP [H]

Synonym: pc1804

Alternate gene names: 46447438

Gene position: 2156942-2157388 (Clockwise)

Preceding gene: 46447436

Following gene: 46447439

Centisome position: 89.33

GC content: 36.47

Gene sequence:

>447_bases
ATGGATCGTGATGTTCAACCTCGCCGCTCTCTTTTTCGTCTCCCCTCTTCTTTACCTAATCTGTGGGATGAAATGGAAGA
TAAAATGAATCGTTGGATGGGATGGGAGGCCGATACTGGAATTAGCATTTCAGAAGATGATTCTAATGTTTATGTAGAAG
CTCATTTACCAGGTCTAAAGTCTGACGAAATAGACATTTCTTTTTATCAAAATGCAGTTTGGATCAAAGGGGAAAAAAAA
CAAGAAGAAGATTATAAAGACCGCAAATTTTATAAACGGTCTAAAACTTCTTATTTTTATCAAATAGATATTCCTACTCA
AGTCGAAGAAAGCACAGAACAAGCCTGCTTCAAAGACGGAGTATTAACCATCACTTTTAAAAAAAATCCCCGTTTACAAG
CACGAAAAATTGCACTCTCAGATAGTAGCGAACAAAAGACTGTGTAA

Upstream 100 bases:

>100_bases
CTAGTGAATCCATTTTCTTATTTATTTTTAATATTTGATACTTTGGGTTATTTCTTAGGAAGATTTTAATAATGATTAAA
ATTTATTTGGAGGTAGTCTT

Downstream 100 bases:

>100_bases
AACAAATTCATCACTCAACTAGATTCTTGTTTTGAAAGACGAGAATCTAGGTAATAAATGAAAAATTCTACACCGAGTAT
TTAAGAAATGATATAGTCAT

Product: putative small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDRDVQPRRSLFRLPSSLPNLWDEMEDKMNRWMGWEADTGISISEDDSNVYVEAHLPGLKSDEIDISFYQNAVWIKGEKK
QEEDYKDRKFYKRSKTSYFYQIDIPTQVEESTEQACFKDGVLTITFKKNPRLQARKIALSDSSEQKTV

Sequences:

>Translated_148_residues
MDRDVQPRRSLFRLPSSLPNLWDEMEDKMNRWMGWEADTGISISEDDSNVYVEAHLPGLKSDEIDISFYQNAVWIKGEKK
QEEDYKDRKFYKRSKTSYFYQIDIPTQVEESTEQACFKDGVLTITFKKNPRLQARKIALSDSSEQKTV
>Mature_148_residues
MDRDVQPRRSLFRLPSSLPNLWDEMEDKMNRWMGWEADTGISISEDDSNVYVEAHLPGLKSDEIDISFYQNAVWIKGEKK
QEEDYKDRKFYKRSKTSYFYQIDIPTQVEESTEQACFKDGVLTITFKKNPRLQARKIALSDSSEQKTV

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17428; Mature: 17428

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDVQPRRSLFRLPSSLPNLWDEMEDKMNRWMGWEADTGISISEDDSNVYVEAHLPGLK
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCC
SDEIDISFYQNAVWIKGEKKQEEDYKDRKFYKRSKTSYFYQIDIPTQVEESTEQACFKDG
CCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC
VLTITFKKNPRLQARKIALSDSSEQKTV
EEEEEECCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDRDVQPRRSLFRLPSSLPNLWDEMEDKMNRWMGWEADTGISISEDDSNVYVEAHLPGLK
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCC
SDEIDISFYQNAVWIKGEKKQEEDYKDRKFYKRSKTSYFYQIDIPTQVEESTEQACFKDG
CCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC
VLTITFKKNPRLQARKIALSDSSEQKTV
EEEEEECCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA