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The map label for this gene is recR

Identifier: 46447358

GI number: 46447358

Start: 2061749

End: 2062345

Strand: Direct

Name: recR

Synonym: pc1724

Alternate gene names: 46447358

Gene position: 2061749-2062345 (Clockwise)

Preceding gene: 46447357

Following gene: 46447360

Centisome position: 85.39

GC content: 39.87

Gene sequence:

>597_bases
ATGCGTTACCCTGAGCATTTATTAAAGTTAATTCATATTTTGAAAAAATTTCCGGGTGTGGGCCATAAAAGTGCCGAGCG
TTTTGCCTTCCATCTATTAAATTGGCCGATGGAGCATCTCATTGAATTAAGCGAAACTGTCAAAAATACAAAAGACAAAA
TAAAACAATGTTTGAACTGCGGCTGTTTAACAGATGAGGCAGCTTGTTATTTTTGTGATATTAATCAGCGAGACTCGCAA
ATTATTTGCGTGACAGCTTTCCCGCGTGATGTGTTTTCAATTGAAGAAACTCACGAATATCGGGGTTTATATCACGTTTT
AGGAGGGGTATTATCTCCTTTAGAAAATCGTGGACCAGAACATTTATCAATTTCTCGACTAAAACATAGAATCCAAGACT
TACAAATTAAAGAGGTTGTTATTGCTTTAGATTCTACGTTAGAAGGAGATGCGACTGCCCTATTCCTCAAACAAGAATTG
GCTGCCGACGACATTCAGATTTCTCGTCTCGCGTTTGGCCTTCCTATGGGGAGCTCACTAGATTATGTAGATGGAGGCAC
TTTAGCCAGAGCATTAGCAGGGCGCAGTCGCTTCTAA

Upstream 100 bases:

>100_bases
ACCCTTCTCTGCTTAAAACAACTTAGTTAACCGGTTTAGTTGCTTTACAACTCATCTACAATCTGTTAAACTTTTTTCAA
AATTCATTGTTGAGGTTAAA

Downstream 100 bases:

>100_bases
AATTAATTTAAACATTTTTTTATGGAAAAGTGTGTTCCGTACTTCCCATATGCAGAGCTTCTAATTTTTCGTTAGCTTTT
TCGTAAAATACATAACTTGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNCGCLTDEAACYFCDINQRDSQ
IICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPEHLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQEL
AADDIQISRLAFGLPMGSSLDYVDGGTLARALAGRSRF

Sequences:

>Translated_198_residues
MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNCGCLTDEAACYFCDINQRDSQ
IICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPEHLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQEL
AADDIQISRLAFGLPMGSSLDYVDGGTLARALAGRSRF
>Mature_198_residues
MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNCGCLTDEAACYFCDINQRDSQ
IICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPEHLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQEL
AADDIQISRLAFGLPMGSSLDYVDGGTLARALAGRSRF

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=37.1859296482412, Blast_Score=146, Evalue=9e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_PARUW (Q6MAF1)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008723.1
- ProteinModelPortal:   Q6MAF1
- SMR:   Q6MAF1
- STRING:   Q6MAF1
- GeneID:   2779495
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1724
- NMPDR:   fig|264201.1.peg.1724
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q6MAF1
- ProtClustDB:   PRK00076
- BioCyc:   CPRO264201:PC1724-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22334; Mature: 22334

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNC
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
GCLTDEAACYFCDINQRDSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPE
CCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSSL
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
DYVDGGTLARALAGRSRF
CCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNC
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
GCLTDEAACYFCDINQRDSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGPE
CCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSSL
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
DYVDGGTLARALAGRSRF
CCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA