| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447321
Identifier: 46447321
GI number: 46447321
Start: 2023823
End: 2024119
Strand: Direct
Name: 46447321
Synonym: pc1687
Alternate gene names: NA
Gene position: 2023823-2024119 (Clockwise)
Preceding gene: 46447320
Following gene: 46447324
Centisome position: 83.82
GC content: 35.69
Gene sequence:
>297_bases TTGTTGCTGCAATCATCATTGCTACAACGGATCGCCACCACCATCATCACCGTGACAGCTCATGCGGCTCAAGCTCACAC GCTCACGCTCATTTTAGCTCATCGTCTCTATAATGCTAAATATTCAATAGAGGGAAATTGCCCCTCTATTGAATATTATC TCTTTCCTTCCCAGCACATCTTTAGTTCAAACAATAAATTTTCAATCGATTCAAAATATTGTTCTATAAAAAGAAATTTA TTGCGATATTGGCCATCTATATCCTTAATTTGTATATTAAATGTAAGTTGCAAATAA
Upstream 100 bases:
>100_bases GGTCAAGTGCAGGGTCAAGAATACTATGATGAAACTCAAGCATATGATGACAGCAATAGAGCATCTACAATGTCTGCTCT TCTTCCTATCGGTGCTTTAG
Downstream 100 bases:
>100_bases CTAATTTATTAAAAAATTTGTTGCAGCTGCTACTAGAAATCCTAAAACTTTAATTTCAAACCCATTAGACGTCGTTGCAT GAATTTTTCTAGGCATCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MLLQSSLLQRIATTIITVTAHAAQAHTLTLILAHRLYNAKYSIEGNCPSIEYYLFPSQHIFSSNNKFSIDSKYCSIKRNL LRYWPSISLICILNVSCK
Sequences:
>Translated_98_residues MLLQSSLLQRIATTIITVTAHAAQAHTLTLILAHRLYNAKYSIEGNCPSIEYYLFPSQHIFSSNNKFSIDSKYCSIKRNL LRYWPSISLICILNVSCK >Mature_98_residues MLLQSSLLQRIATTIITVTAHAAQAHTLTLILAHRLYNAKYSIEGNCPSIEYYLFPSQHIFSSNNKFSIDSKYCSIKRNL LRYWPSISLICILNVSCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11165; Mature: 11165
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQSSLLQRIATTIITVTAHAAQAHTLTLILAHRLYNAKYSIEGNCPSIEYYLFPSQHI CCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCHHE FSSNNKFSIDSKYCSIKRNLLRYWPSISLICILNVSCK ECCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCC >Mature Secondary Structure MLLQSSLLQRIATTIITVTAHAAQAHTLTLILAHRLYNAKYSIEGNCPSIEYYLFPSQHI CCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCHHE FSSNNKFSIDSKYCSIKRNLLRYWPSISLICILNVSCK ECCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA