| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447317
Identifier: 46447317
GI number: 46447317
Start: 2020974
End: 2021789
Strand: Direct
Name: 46447317
Synonym: pc1683
Alternate gene names: NA
Gene position: 2020974-2021789 (Clockwise)
Preceding gene: 46447296
Following gene: 46447318
Centisome position: 83.7
GC content: 34.44
Gene sequence:
>816_bases ATGAAAAAATTAGCATTTTTTGTTTTATGTCTAAGCTGTTTGTTAGCAAAAGTATCTATTTTATCTGCAACACCTTCTAA TCTTTCTTCTTCGACAGAATCGATGGACAGTGGAATTGTTCTCTTTACACCCCCTTCTGGTTGGAGAATGGCTGACCCAA AAATACTCCCAGAAAGAGTCAAATTAATGGTCGTAGGGCAAGGTCCTTCTGCATTTCCCCCTTCCATGAATTTGAGTTTA GAACCTTATTCAGGATCGCTTAAACAATATCTTAAAAGTGTAAAAAACACTAATATGGCTCAGGGTTATCAATGGAAAGA TTTAGGAACAATTCGTACAGAAGCAGGTAATGCCAGCTTATCTCAGGTTGATACTAAATCTGAATGGGGTAGTGTAAGAC TTATGCATGTGATTCTTTTAAAAAATGGAGTCATTTACATTTTAACAGCCTCAGCATTGCAAGATGAGTTTTCTCAATTT TACAAAGATTTTTTCAACTCTATGCGTTCTTTGCGAGTTGCGAAAGAAGCATTTGAAATGATCGTTAATACACAGCAAAG AACTCAACTCAAAAATGCGGCACAAAAAGTCAAAAATCAGTGGGAAAAAGAACTCTCACAAAATATTAAAGATAATCCAA ATGACACTTTAGAAAATATAAAAGAACAAACTTTTACAAGTAAAAATTTCCAAGCTAGTGTTTGGATACCTTTTAAGCAC ATGATTAACCAAAAATATAATGAGATGGGTGCTGAATGGCAATCACTTCTTTTGAAACAAGTCGAAGATGACCTTTTTGA AACATCCGTCAACTAA
Upstream 100 bases:
>100_bases ATTGATTTACTCTGACAAAGTTGATTTCAAGTTGGTTCAAATTAAATTGACTGCATAAACATTTGTTAGTTGCTTTCTAT TTTTCAAGTTATGGGGGATC
Downstream 100 bases:
>100_bases ATTAAAACGATAACATTTAGATAATGATATCAGGAGGAAAAATGAATTTTTTAAATAAGTGGATCGTAATCGTTACAGCC ATTGTCATGACAGGTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKLAFFVLCLSCLLAKVSILSATPSNLSSSTESMDSGIVLFTPPSGWRMADPKILPERVKLMVVGQGPSAFPPSMNLSL EPYSGSLKQYLKSVKNTNMAQGYQWKDLGTIRTEAGNASLSQVDTKSEWGSVRLMHVILLKNGVIYILTASALQDEFSQF YKDFFNSMRSLRVAKEAFEMIVNTQQRTQLKNAAQKVKNQWEKELSQNIKDNPNDTLENIKEQTFTSKNFQASVWIPFKH MINQKYNEMGAEWQSLLLKQVEDDLFETSVN
Sequences:
>Translated_271_residues MKKLAFFVLCLSCLLAKVSILSATPSNLSSSTESMDSGIVLFTPPSGWRMADPKILPERVKLMVVGQGPSAFPPSMNLSL EPYSGSLKQYLKSVKNTNMAQGYQWKDLGTIRTEAGNASLSQVDTKSEWGSVRLMHVILLKNGVIYILTASALQDEFSQF YKDFFNSMRSLRVAKEAFEMIVNTQQRTQLKNAAQKVKNQWEKELSQNIKDNPNDTLENIKEQTFTSKNFQASVWIPFKH MINQKYNEMGAEWQSLLLKQVEDDLFETSVN >Mature_271_residues MKKLAFFVLCLSCLLAKVSILSATPSNLSSSTESMDSGIVLFTPPSGWRMADPKILPERVKLMVVGQGPSAFPPSMNLSL EPYSGSLKQYLKSVKNTNMAQGYQWKDLGTIRTEAGNASLSQVDTKSEWGSVRLMHVILLKNGVIYILTASALQDEFSQF YKDFFNSMRSLRVAKEAFEMIVNTQQRTQLKNAAQKVKNQWEKELSQNIKDNPNDTLENIKEQTFTSKNFQASVWIPFKH MINQKYNEMGAEWQSLLLKQVEDDLFETSVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30669; Mature: 30669
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLAFFVLCLSCLLAKVSILSATPSNLSSSTESMDSGIVLFTPPSGWRMADPKILPERV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCE KLMVVGQGPSAFPPSMNLSLEPYSGSLKQYLKSVKNTNMAQGYQWKDLGTIRTEAGNASL EEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHH SQVDTKSEWGSVRLMHVILLKNGVIYILTASALQDEFSQFYKDFFNSMRSLRVAKEAFEM HHCCCHHHCCHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVNTQQRTQLKNAAQKVKNQWEKELSQNIKDNPNDTLENIKEQTFTSKNFQASVWIPFKH HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHH MINQKYNEMGAEWQSLLLKQVEDDLFETSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLAFFVLCLSCLLAKVSILSATPSNLSSSTESMDSGIVLFTPPSGWRMADPKILPERV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCE KLMVVGQGPSAFPPSMNLSLEPYSGSLKQYLKSVKNTNMAQGYQWKDLGTIRTEAGNASL EEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHH SQVDTKSEWGSVRLMHVILLKNGVIYILTASALQDEFSQFYKDFFNSMRSLRVAKEAFEM HHCCCHHHCCHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVNTQQRTQLKNAAQKVKNQWEKELSQNIKDNPNDTLENIKEQTFTSKNFQASVWIPFKH HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHH MINQKYNEMGAEWQSLLLKQVEDDLFETSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA