| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447271
Identifier: 46447271
GI number: 46447271
Start: 1958934
End: 1959386
Strand: Direct
Name: 46447271
Synonym: pc1637
Alternate gene names: NA
Gene position: 1958934-1959386 (Clockwise)
Preceding gene: 46447268
Following gene: 46447274
Centisome position: 81.13
GC content: 34.44
Gene sequence:
>453_bases ATGTGGATGGAAATAGAATCAAACTATACGTTTAATAGACCTTTGGCTAGCTCCCTTTCAGGGAAACCTATACTCAGTGC AGCATCAAGAAAGCGTTATCAAAGAGAAAGATTTCTTGCTGTAAAAGTTGGTTCTGATACCATGGTTCCGTTTTATTCCC AAGGGACATTCAATACGGATTTGTTTAATCTATGGCTAGAACAATTTTTAATTCCAGAATTAAGACCTAGCCAAGCTGGG ATTTTGGACAATGCAACATTTCATCAATCTCAAAAAACAAAAGATTTAATTCAATCCGCTGGGTATCAAGTGCTTTTCTT GATGCCCTATTCACCCGACTTAAATCCAATAGAATTATTCTGGGCTAATTTAAAAAGAACGATTAGCGAAAATTTAAAAA AATTTACTTCCTTATCTGAAGCGATCGATTATTCATTTTTAGCATACTCATAA
Upstream 100 bases:
>100_bases ATGTGCAGCTTGAATCCCCTGAACTTTTGATACATCTTTTGAAACTAAATTTCTTGTTTTTTCTAAAAAATAGAAAATAG GCTACTAAAAAATCGTTTTT
Downstream 100 bases:
>100_bases CAAAAAATATAATTTTTAATTTAACCCCCTCTTTATTAACGATTTTTTAAACACTTTCAAGTTGTGTTAATATTCAAAAT AATGCGAGAGAAACATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Transposase; ISSpo6 Transposase OrfB; Transposase And Inactivated Derivatives-Like Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde6 Transposase OrfB; ISHde5 Transposase OrfA; Transposase Family Protein; Transposase Of Insertion Sequence; Insertion Sequence Transposase Protein; Transposase And Inactivated Derivative
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTDLFNLWLEQFLIPELRPSQAG ILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELFWANLKRTISENLKKFTSLSEAIDYSFLAYS
Sequences:
>Translated_150_residues MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTDLFNLWLEQFLIPELRPSQAG ILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELFWANLKRTISENLKKFTSLSEAIDYSFLAYS >Mature_150_residues MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTDLFNLWLEQFLIPELRPSQAG ILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELFWANLKRTISENLKKFTSLSEAIDYSFLAYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17294; Mature: 17294
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTD CEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCHH LFNLWLEQFLIPELRPSQAGILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELF HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHH WANLKRTISENLKKFTSLSEAIDYSFLAYS HHHHHHHHHHHHHHHHHHHHHHCCHHEECC >Mature Secondary Structure MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTD CEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCHH LFNLWLEQFLIPELRPSQAGILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELF HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHH WANLKRTISENLKKFTSLSEAIDYSFLAYS HHHHHHHHHHHHHHHHHHHHHHCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA