The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ybbP [H]

Identifier: 46447267

GI number: 46447267

Start: 1951626

End: 1952963

Strand: Direct

Name: ybbP [H]

Synonym: pc1633

Alternate gene names: 46447267

Gene position: 1951626-1952963 (Clockwise)

Preceding gene: 46447266

Following gene: 46447268

Centisome position: 80.83

GC content: 34.45

Gene sequence:

>1338_bases
TTGATCATAGCTTTGTTCGTCTACTATCTTTTGTCTTTTTTTTGGAATACGCGTGCTATGGATGTGCTTTATGGGAGTTT
AGCTTTTTTAGCTTTCTTTGCTCTTTCTAAATGGCTAAATTTGCCTGTCTTAGAAAAACTAATGTTTTATGTCGTCAACG
TCGCTGTATTAGCTTTATTAATTATCTTTCAGCCAGAAATTCGACTTTCTTTATCTAAACTCAGTTTAAAAACTAAAAAA
TATCGCGAAGTGACAGAGTTCGATAAATTTCTTGAAAGCATCTCTCAATCTATCTACCGCTTATCAGAAAGGCGTATAGG
AGCCCTTGTCGTTCTTGAAAATCAAGATTCTTTAGAAGACTTAGCCATCAAAGCAGTATTAATTAATGCGCAATTCTCCC
CTGAGTTATTAGAATCTATTTTTATTACCACAACACCTTTGCATGATGGAGCTGTCCTTGTTCGAGGAACGACGATTTTA
TCTGCAGCAACTATTCTAATTACCATCCATCGACCAATTGGTGAAGTTCCAAAAGGATACGAGTTTTTAGATAGTTGGCC
TATCGTTTTAATGCAAACTGTCAGCGGTCCTCAAGATCAAGTCCTTAATCTGAAAAATCAAGGGCTTGAGCTTACTTTTG
ATTTCAATGAAATTTCAAAAGAGCAATTAGATGCTTTACAATCGACAAGTCCATACGACGATGAAATTAACTTTTACATT
CCAGATGCTTGGAAAAAAGTATCTATTCCTTTTTTAGCAAGAGGCCCTGTTGCTTTAAATGACCCTGAATCAAAATTTCT
TCATTTAAGCTTTTTGAAACAGCAGTTAATTCCTTTGAAAAATGACCTTCCCTTACACGTATATTATCCTCTTAAGTATA
GCGATGAAATCAATCCTAATACTTATGCTTTAGCAATTAATGATTATGTTCATATGAAGAACCATATTCCTATTTTAAAG
CTCCCCTTACTCGCCAGTAATGTCAGTAAACTTTTTGTTGAAATTGTCAAAGATAATTTAGAAATTGAAATTGTAACAGC
CCCAAAAACAGAGCGTCGTAAACTCGAATGGGGAATTGGCTTTATTGATGACTCTCACTTAGAGGATACTTACGCAGCTT
TTTTACTTAGCAATACCAAATCAAATAATGGGTATTCTCAATCGAAAGTTCAAGAAAGGGAAAAATATTTCAGGCAAAGA
TTCCGCAATTACATGCAACGTTTAACTCTTTATTTAAATTCGAATCAAAAATTGGAATTAGAAAGCTCTTTGAAAGATCA
AGAAATTCGAATTAAGATTCCGGCCTTATCTCAAGGAGTTCCAACTAATGCCAGCTGA

Upstream 100 bases:

>100_bases
AAGACATTTTAAAAGTGATGCAACAATTTTTTTCAACCTAAAGCAAGTTTTGGCATAGTGTATGTGGATTTTTCAGCTGT
TCATTCCAGGAATAGAGATA

Downstream 100 bases:

>100_bases
GCGTTTTTTTACCTCTGAGGAAATATCTTTGCATCAACATGTGCTATTAAAAGATAATGAATTTCACCATCTTGCGCACG
TGATGAGGGCAAAAAAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIIALFVYYLLSFFWNTRAMDVLYGSLAFLAFFALSKWLNLPVLEKLMFYVVNVAVLALLIIFQPEIRLSLSKLSLKTKK
YREVTEFDKFLESISQSIYRLSERRIGALVVLENQDSLEDLAIKAVLINAQFSPELLESIFITTTPLHDGAVLVRGTTIL
SAATILITIHRPIGEVPKGYEFLDSWPIVLMQTVSGPQDQVLNLKNQGLELTFDFNEISKEQLDALQSTSPYDDEINFYI
PDAWKKVSIPFLARGPVALNDPESKFLHLSFLKQQLIPLKNDLPLHVYYPLKYSDEINPNTYALAINDYVHMKNHIPILK
LPLLASNVSKLFVEIVKDNLEIEIVTAPKTERRKLEWGIGFIDDSHLEDTYAAFLLSNTKSNNGYSQSKVQEREKYFRQR
FRNYMQRLTLYLNSNQKLELESSLKDQEIRIKIPALSQGVPTNAS

Sequences:

>Translated_445_residues
MIIALFVYYLLSFFWNTRAMDVLYGSLAFLAFFALSKWLNLPVLEKLMFYVVNVAVLALLIIFQPEIRLSLSKLSLKTKK
YREVTEFDKFLESISQSIYRLSERRIGALVVLENQDSLEDLAIKAVLINAQFSPELLESIFITTTPLHDGAVLVRGTTIL
SAATILITIHRPIGEVPKGYEFLDSWPIVLMQTVSGPQDQVLNLKNQGLELTFDFNEISKEQLDALQSTSPYDDEINFYI
PDAWKKVSIPFLARGPVALNDPESKFLHLSFLKQQLIPLKNDLPLHVYYPLKYSDEINPNTYALAINDYVHMKNHIPILK
LPLLASNVSKLFVEIVKDNLEIEIVTAPKTERRKLEWGIGFIDDSHLEDTYAAFLLSNTKSNNGYSQSKVQEREKYFRQR
FRNYMQRLTLYLNSNQKLELESSLKDQEIRIKIPALSQGVPTNAS
>Mature_445_residues
MIIALFVYYLLSFFWNTRAMDVLYGSLAFLAFFALSKWLNLPVLEKLMFYVVNVAVLALLIIFQPEIRLSLSKLSLKTKK
YREVTEFDKFLESISQSIYRLSERRIGALVVLENQDSLEDLAIKAVLINAQFSPELLESIFITTTPLHDGAVLVRGTTIL
SAATILITIHRPIGEVPKGYEFLDSWPIVLMQTVSGPQDQVLNLKNQGLELTFDFNEISKEQLDALQSTSPYDDEINFYI
PDAWKKVSIPFLARGPVALNDPESKFLHLSFLKQQLIPLKNDLPLHVYYPLKYSDEINPNTYALAINDYVHMKNHIPILK
LPLLASNVSKLFVEIVKDNLEIEIVTAPKTERRKLEWGIGFIDDSHLEDTYAAFLLSNTKSNNGYSQSKVQEREKYFRQR
FRNYMQRLTLYLNSNQKLELESSLKDQEIRIKIPALSQGVPTNAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 51051; Mature: 51051

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIALFVYYLLSFFWNTRAMDVLYGSLAFLAFFALSKWLNLPVLEKLMFYVVNVAVLALL
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IIFQPEIRLSLSKLSLKTKKYREVTEFDKFLESISQSIYRLSERRIGALVVLENQDSLED
HHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHH
LAIKAVLINAQFSPELLESIFITTTPLHDGAVLVRGTTILSAATILITIHRPIGEVPKGY
HEEEEEEEECCCCHHHHHHHHEEECCCCCCEEEEECHHHHHEEEEEEEEECCCCCCCCCC
EFLDSWPIVLMQTVSGPQDQVLNLKNQGLELTFDFNEISKEQLDALQSTSPYDDEINFYI
HHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEEEHHHHCHHHHHHHHCCCCCCCCCEEEE
PDAWKKVSIPFLARGPVALNDPESKFLHLSFLKQQLIPLKNDLPLHVYYPLKYSDEINPN
CCCCCEECCCEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCC
TYALAINDYVHMKNHIPILKLPLLASNVSKLFVEIVKDNLEIEIVTAPKTERRKLEWGIG
EEEEEEECEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC
FIDDSHLEDTYAAFLLSNTKSNNGYSQSKVQEREKYFRQRFRNYMQRLTLYLNSNQKLEL
CCCCCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEE
ESSLKDQEIRIKIPALSQGVPTNAS
CCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIIALFVYYLLSFFWNTRAMDVLYGSLAFLAFFALSKWLNLPVLEKLMFYVVNVAVLALL
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IIFQPEIRLSLSKLSLKTKKYREVTEFDKFLESISQSIYRLSERRIGALVVLENQDSLED
HHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHH
LAIKAVLINAQFSPELLESIFITTTPLHDGAVLVRGTTILSAATILITIHRPIGEVPKGY
HEEEEEEEECCCCHHHHHHHHEEECCCCCCEEEEECHHHHHEEEEEEEEECCCCCCCCCC
EFLDSWPIVLMQTVSGPQDQVLNLKNQGLELTFDFNEISKEQLDALQSTSPYDDEINFYI
HHHCCCCEEEEECCCCCHHHHHHHCCCCEEEEEEHHHHCHHHHHHHHCCCCCCCCCEEEE
PDAWKKVSIPFLARGPVALNDPESKFLHLSFLKQQLIPLKNDLPLHVYYPLKYSDEINPN
CCCCCEECCCEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCC
TYALAINDYVHMKNHIPILKLPLLASNVSKLFVEIVKDNLEIEIVTAPKTERRKLEWGIG
EEEEEEECEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCC
FIDDSHLEDTYAAFLLSNTKSNNGYSQSKVQEREKYFRQRFRNYMQRLTLYLNSNQKLEL
CCCCCCCHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEE
ESSLKDQEIRIKIPALSQGVPTNAS
CCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]