Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447250

Identifier: 46447250

GI number: 46447250

Start: 1932755

End: 1935196

Strand: Direct

Name: 46447250

Synonym: pc1616

Alternate gene names: NA

Gene position: 1932755-1935196 (Clockwise)

Preceding gene: 46447249

Following gene: 46447251

Centisome position: 80.05

GC content: 35.63

Gene sequence:

>2442_bases
GTGATTCAACTAATTCGGGTGGTAATTTTGAATATTCAGAACATAAGATCTAATTCTAGTAATTTAATTGTCAATACAGA
CACTCATTCTTACATTCGATCAAACGATCGTTTAAAATTTTCTGAACGAATTGTTTTATTGTGCAAAACAATTTTTCAGA
GTTTTCTCAACTTATTCTTTAATTATCTCAAAAAAGAACAGCTTCAATCTCAATGGAGGGAAGTTTTTTGGGGACAAAAA
GAATTCGTCATTTCTAATCTTGCTCCAACTCAATCAGAATCTGGGATCTTTCTATCAAGTCCGAGCCAAATTTCGGGTTT
TGCCCTCCCTTTTATAACTGCGAATCGAAATCAAGAAACTATTGATTATCCTAAGAATGAAAGCAATTTGGTAATAAACT
CTTTAGATACTTCAATAGACTCAAATACCTCAAACAGTCATTTCCCAAAAACAGTGGATCCCTTAATAATTCCCCCTTCC
CAACTGGCACCTTCACCCCAAGGTGTTAAACTGAGCTTTCAAGGAGGAACTTCTTTAATCATTCCTTATTCTCAATTAGC
TTTGTTAAAGAAAAAATCACCCTATTTTAACAGCCTTTGGTCAGGACATTTTCAAGAAACGCTTCAAGTTCCCCTTGCTA
TAACAGAAAAAAAATTTACTAACTTACTACAGTGCTTAATGGATGCTAATTTTAAACTTTCGGTGGAAGACATTCCTTGT
TCCATTGCATTAGCCGATTATTACCAATTAACAGAAGTGGTAGAAAACTTAGAAAAACAGCTGATTAAAATCTATCAATC
AGAGGATGCTCTATTTAATTCGAACGAAGAAAGTCTCATAGAATTAAAAGAGCTATTAAATTTTGCGCGTCTGTATCAAT
TAAATAATTTAATAAATTATTTAGAGTTCACAGTAGTGAGCGGTTTATTAAACAATACTTCTCATGTGAACGAATTTGAA
AAAATTTTAAACCACTTCTCAAATGAAATAGAAGGACTCAATCTTTCAGGAAAAGATTTTTTTACAGAGGCTCATTTTTT
AGCCTTAAAAAATTGTAAAAATTTAAAAGTGCTGTGTCTAAAAATATTCTACACTCCCATTGACACCGGATTAGCCCATT
TGACGTCTTTAACGGCTTTACAACACTTAGATCTCAGTGAATGCTATCTACTTAAGGATACTGGGTTAGCCCATTTGTCA
TCTTTAACCGCTTTACAGTATTTAGATTTAAGTGATTCTGGAAATTTCACGGATGCTGGGTTAGCCCATTTAACACCTTT
AGTCTCCTTGCAACATTTAGATTTAAGTAAGAGTGAAAATCTCACTGGCGATGGATTAGCCCATTTGACACCTTTAGTCG
CTTTGCGACACTTAGGTTTGAGTGATTGTAGAAATCTCACGGATGCTGGATTAGCACATTTGACACCTTTAGTCGCCTTG
CGACACTTAGATTTAAGTGAGTGTAAAAATCTCACTGACGATGGACTAGTGCATTTATCTTCCTTAGTCGCTTTGCAATA
TTTATCTCTAAAACTGTGTGAAAATCTCACCGATGCTGGATTAGCGCATTTGACGCCCTTGACGACTTTAGAGCATTTGG
ATTTAGGTTTGGATTTAGGTTGTTGCCATAATCTCACTGACGATGGGTTAGCACATTTGTCGTCCTTAACAGCTTTAAAG
CATTTAGATCTAAGTTGGCGTGAAAATCTCACGGATGCTGGATTAGCACATTTAACGCCCTTAACGGCTTTAAGGCATTT
AGACTTAAGTTGGTGTGAAAATCTCACGGATGAGGGATTGGCCTATTTGACACCCCTAGTTGCTTTACAGTATTTGAGTT
TAAAGGGCAGTGACATCACTGATGAAGGACTAGAACATTTGGCACACTTAAGTGCTTTACGGCATTTAAGTTTGAATGAC
TGCCGTAGGATCAATGGCTATGGATTAGCGCACTTGACATCTTTAGTGAATTTAGAGCATCTAGACTTAAGCGGCTGCTA
TCACCTTCCTAGTTTTCAATTAATTTATTTATCATCTTTAGTGAATTTACAGCATTTAAACCTAAGTGAGTGTTTTGGTC
TTTGTCACGATGGATTAGAAGATTTGACTCCTTTAATGAATTTGCAGTATTTAGATCTAAGTGGGTGTATAAATCTGACG
GACCAGGGACTGGCATATTTGACCTCTTTAGTAGGTCTAGATTTACAACATTTAGATCTAAGTGGGTGTAAAAAAATCAC
TGACACTGGATTGGCACATTTGACCTCCTTAGTGACTTTACAGCATTTGAATTTGAGTGAATGTGTAAATCTCACTGATA
CTGGATTGGCACATTTAGTTTCCCTAGTAAATTTACAATATTTAGAGCTACGAGAATGTAAAAACATTACAGACGCTGGG
TTGGCTCATTACATACAAAATCAACAAATAATCCTTCGTTAA

Upstream 100 bases:

>100_bases
TTTTTCAATAACAAATTTAAATATAGATCTCTTTTGTTTAAAATTGCGATGCTATTTATTCTTATAGTATTTTATTAATA
AATAATGTAAAATTTAAAAA

Downstream 100 bases:

>100_bases
AAGAAGGTAAAAAAAAGTAGTGTCAATTGAGCGAACGTTCTGCGTATGAGAATATTATGTGGATGTTTGAACACTCAAAA
TTATAGCTCAGCACTATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 813; Mature: 813

Protein sequence:

>813_residues
MIQLIRVVILNIQNIRSNSSNLIVNTDTHSYIRSNDRLKFSERIVLLCKTIFQSFLNLFFNYLKKEQLQSQWREVFWGQK
EFVISNLAPTQSESGIFLSSPSQISGFALPFITANRNQETIDYPKNESNLVINSLDTSIDSNTSNSHFPKTVDPLIIPPS
QLAPSPQGVKLSFQGGTSLIIPYSQLALLKKKSPYFNSLWSGHFQETLQVPLAITEKKFTNLLQCLMDANFKLSVEDIPC
SIALADYYQLTEVVENLEKQLIKIYQSEDALFNSNEESLIELKELLNFARLYQLNNLINYLEFTVVSGLLNNTSHVNEFE
KILNHFSNEIEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLS
SLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVAL
RHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALK
HLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLND
CRRINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLT
DQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELRECKNITDAG
LAHYIQNQQIILR

Sequences:

>Translated_813_residues
MIQLIRVVILNIQNIRSNSSNLIVNTDTHSYIRSNDRLKFSERIVLLCKTIFQSFLNLFFNYLKKEQLQSQWREVFWGQK
EFVISNLAPTQSESGIFLSSPSQISGFALPFITANRNQETIDYPKNESNLVINSLDTSIDSNTSNSHFPKTVDPLIIPPS
QLAPSPQGVKLSFQGGTSLIIPYSQLALLKKKSPYFNSLWSGHFQETLQVPLAITEKKFTNLLQCLMDANFKLSVEDIPC
SIALADYYQLTEVVENLEKQLIKIYQSEDALFNSNEESLIELKELLNFARLYQLNNLINYLEFTVVSGLLNNTSHVNEFE
KILNHFSNEIEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLS
SLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVAL
RHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALK
HLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLND
CRRINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLT
DQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELRECKNITDAG
LAHYIQNQQIILR
>Mature_813_residues
MIQLIRVVILNIQNIRSNSSNLIVNTDTHSYIRSNDRLKFSERIVLLCKTIFQSFLNLFFNYLKKEQLQSQWREVFWGQK
EFVISNLAPTQSESGIFLSSPSQISGFALPFITANRNQETIDYPKNESNLVINSLDTSIDSNTSNSHFPKTVDPLIIPPS
QLAPSPQGVKLSFQGGTSLIIPYSQLALLKKKSPYFNSLWSGHFQETLQVPLAITEKKFTNLLQCLMDANFKLSVEDIPC
SIALADYYQLTEVVENLEKQLIKIYQSEDALFNSNEESLIELKELLNFARLYQLNNLINYLEFTVVSGLLNNTSHVNEFE
KILNHFSNEIEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLS
SLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVAL
RHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTALK
HLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLND
CRRINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLT
DQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVNLQYLELRECKNITDAG
LAHYIQNQQIILR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=313, Percent_Identity=34.185303514377, Blast_Score=126, Evalue=7e-29,
Organism=Homo sapiens, GI161333852, Length=517, Percent_Identity=27.0793036750484, Blast_Score=124, Evalue=5e-28,
Organism=Homo sapiens, GI284447308, Length=312, Percent_Identity=33.0128205128205, Blast_Score=104, Evalue=4e-22,
Organism=Homo sapiens, GI6912466, Length=314, Percent_Identity=28.9808917197452, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI161333854, Length=478, Percent_Identity=25.3138075313808, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI27734755, Length=313, Percent_Identity=32.2683706070287, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI289666746, Length=246, Percent_Identity=32.1138211382114, Blast_Score=84, Evalue=8e-16,
Organism=Homo sapiens, GI296531375, Length=238, Percent_Identity=33.1932773109244, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI284447314, Length=238, Percent_Identity=32.7731092436975, Blast_Score=71, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25151694, Length=311, Percent_Identity=29.2604501607717, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25151696, Length=311, Percent_Identity=29.2604501607717, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322549, Length=201, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI17647819, Length=359, Percent_Identity=31.4763231197772, Blast_Score=123, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24662818, Length=251, Percent_Identity=35.8565737051793, Blast_Score=97, Evalue=5e-20,
Organism=Drosophila melanogaster, GI21357913, Length=190, Percent_Identity=34.7368421052632, Blast_Score=81, Evalue=4e-15,
Organism=Drosophila melanogaster, GI19921840, Length=359, Percent_Identity=27.5766016713092, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI161076545, Length=312, Percent_Identity=32.0512820512821, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24652783, Length=312, Percent_Identity=32.0512820512821, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI161076549, Length=312, Percent_Identity=32.0512820512821, Blast_Score=76, Evalue=9e-14,
Organism=Drosophila melanogaster, GI161076547, Length=312, Percent_Identity=32.0512820512821, Blast_Score=76, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90513; Mature: 90513

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLIRVVILNIQNIRSNSSNLIVNTDTHSYIRSNDRLKFSERIVLLCKTIFQSFLNLFF
CHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
NYLKKEQLQSQWREVFWGQKEFVISNLAPTQSESGIFLSSPSQISGFALPFITANRNQET
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCC
IDYPKNESNLVINSLDTSIDSNTSNSHFPKTVDPLIIPPSQLAPSPQGVKLSFQGGTSLI
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCHHCCCCCCCEEEEECCCCEEE
IPYSQLALLKKKSPYFNSLWSGHFQETLQVPLAITEKKFTNLLQCLMDANFKLSVEDIPC
ECHHHHHHHHCCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SIALADYYQLTEVVENLEKQLIKIYQSEDALFNSNEESLIELKELLNFARLYQLNNLINY
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEFTVVSGLLNNTSHVNEFEKILNHFSNEIEGLNLSGKDFFTEAHFLALKNCKNLKVLCL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHEEH
KIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTDAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHEEECCCCCCCCCCC
LAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVAL
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
RHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLG
HCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHCHHHHHHHHCCCCCHH
CCHNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGL
HHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCHH
AYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEH
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHC
LDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLT
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCC
DQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLV
HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHH
SLVNLQYLELRECKNITDAGLAHYIQNQQIILR
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MIQLIRVVILNIQNIRSNSSNLIVNTDTHSYIRSNDRLKFSERIVLLCKTIFQSFLNLFF
CHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
NYLKKEQLQSQWREVFWGQKEFVISNLAPTQSESGIFLSSPSQISGFALPFITANRNQET
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCC
IDYPKNESNLVINSLDTSIDSNTSNSHFPKTVDPLIIPPSQLAPSPQGVKLSFQGGTSLI
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCHHCCCCCCCEEEEECCCCEEE
IPYSQLALLKKKSPYFNSLWSGHFQETLQVPLAITEKKFTNLLQCLMDANFKLSVEDIPC
ECHHHHHHHHCCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SIALADYYQLTEVVENLEKQLIKIYQSEDALFNSNEESLIELKELLNFARLYQLNNLINY
EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEFTVVSGLLNNTSHVNEFEKILNHFSNEIEGLNLSGKDFFTEAHFLALKNCKNLKVLCL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHEEH
KIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTDAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHEEECCCCCCCCCCC
LAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVAL
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
RHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLG
HCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHCHHHHHHHHCCCCCHH
CCHNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGL
HHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCHH
AYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEH
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHC
LDLSGCYHLPSFQLIYLSSLVNLQHLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLT
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCC
DQGLAYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLV
HHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHH
SLVNLQYLELRECKNITDAGLAHYIQNQQIILR
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA