| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447247
Identifier: 46447247
GI number: 46447247
Start: 1929430
End: 1929642
Strand: Direct
Name: 46447247
Synonym: pc1613
Alternate gene names: NA
Gene position: 1929430-1929642 (Clockwise)
Preceding gene: 46447246
Following gene: 46447248
Centisome position: 79.91
GC content: 38.97
Gene sequence:
>213_bases TTGATTCGCTCCCATCAATTAAAAAGATGGGTTGTTGTTCCTTTGCCTTTAAATCCATCGCCAAACATTTGTTCTCCGCC TTTGTCAATTAAAAAAACCATAACAGCCAAGCATTGCCAATTCAACGTATCTGCCAGCTTTGCTGAATCTAGTGGGACTT GCAGCACTCGATTTAACGCTTCATCTTTCTGTCATCTACCTAAATTATTATGA
Upstream 100 bases:
>100_bases AATTCTCAAGCTAAAAGATAAAAATTCTACTTTAGCCGATGCGAGGCTTCACCATTTTCACTCAACTTCATTAGCAGCTA TGCTTTTTCGAAAGTGAGAG
Downstream 100 bases:
>100_bases GCTCCAGGTCTTGATTCCCATTGTTTACCCTTAGTTATATCGCACCAACGTAAACGTTATGAGTATTCAAAAGAGGCTAT TATAAATTTTTTTATGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MIRSHQLKRWVVVPLPLNPSPNICSPPLSIKKTITAKHCQFNVSASFAESSGTCSTRFNASSFCHLPKLL
Sequences:
>Translated_70_residues MIRSHQLKRWVVVPLPLNPSPNICSPPLSIKKTITAKHCQFNVSASFAESSGTCSTRFNASSFCHLPKLL >Mature_70_residues MIRSHQLKRWVVVPLPLNPSPNICSPPLSIKKTITAKHCQFNVSASFAESSGTCSTRFNASSFCHLPKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7724; Mature: 7724
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSHQLKRWVVVPLPLNPSPNICSPPLSIKKTITAKHCQFNVSASFAESSGTCSTRFNA CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCC SSFCHLPKLL CCCCCCCCCC >Mature Secondary Structure MIRSHQLKRWVVVPLPLNPSPNICSPPLSIKKTITAKHCQFNVSASFAESSGTCSTRFNA CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEECCCC SSFCHLPKLL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA