| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447217
Identifier: 46447217
GI number: 46447217
Start: 1900144
End: 1900920
Strand: Direct
Name: 46447217
Synonym: pc1583
Alternate gene names: NA
Gene position: 1900144-1900920 (Clockwise)
Preceding gene: 46447215
Following gene: 46447220
Centisome position: 78.7
GC content: 32.69
Gene sequence:
>777_bases ATGAAAAAAACGATAATTTTTTCAATCTATCTAATAATGGTGGTATCTTTCTGTTATCTTTTCCCAGCCTTAAATGCTAG AGAATATGAAATAAAGCAATACTTACTACCTAAAAATCACCCATTACAAATTCCCTTAAAAAATCTTTTTCAAACTCCAA ACATGTTTGATTCTCCCAGAGAGTGGCATCTCTCAGGATTCCAAGTGCTTGATCGCGTTCATCGCAAGTTAATGGTAGCT CGCCATCCAACTGTAAAAAATTATTTATTTAAGAAATTTCAAAATACAGTTTCAGCTAAAAAACAGTTAAACAATTACTT AAAGAGAGCATCAGGTGCGAAAGCACTGAGCCAATTTATTATACGCAATCATATAAACCATATTATCGTTCCTAAAAAAT GGCTATATCCTCTTCCAAAAAAGTTTTCTGATTCGAAAACGAAAGAGCAAACTTATATTTTAATTGTGGAAGAAATGGAT ATTTGTGAAGGTGGGGTAGATCCAATGGGAGAAGTCGCGCTTCATTACCAACATATTCAAGAAGAATTATTGAAAGAGCT TTGCTTTGTTGTTTTTTGTTTTAGGGGTTTAGACTCTATGCTTCACAATATGCCTTTCACCTATCAAAACAAAATCACTT TCATTGATACTGAAAAGTGGAAGGAAAAAAGAGAAGGTTATTTACAAAGAGCGATGCCATTTCTTCGACCAGAAAGCCAA GCTTACGCCTTAGAAATTTTTAGAGCTTTAGAAAATCAAGAAATTAAACTAAATTAA
Upstream 100 bases:
>100_bases TAGAGAATTTGAAGGAATGACTTTATTTCCAGTACATGTTATTAACTTTTACCTTATAAAAAATGCTGATGGACAAAACT ACTTTTTCAAAAAGAGGTCT
Downstream 100 bases:
>100_bases AAAGATTCTTTGCAATTCAATTATCCAATCTCTATTCAATAGAATTTTAGAAAAATTTGCTGTTGGCAAGGGATTTATGG AATATTTTCAAGGAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKKTIIFSIYLIMVVSFCYLFPALNAREYEIKQYLLPKNHPLQIPLKNLFQTPNMFDSPREWHLSGFQVLDRVHRKLMVA RHPTVKNYLFKKFQNTVSAKKQLNNYLKRASGAKALSQFIIRNHINHIIVPKKWLYPLPKKFSDSKTKEQTYILIVEEMD ICEGGVDPMGEVALHYQHIQEELLKELCFVVFCFRGLDSMLHNMPFTYQNKITFIDTEKWKEKREGYLQRAMPFLRPESQ AYALEIFRALENQEIKLN
Sequences:
>Translated_258_residues MKKTIIFSIYLIMVVSFCYLFPALNAREYEIKQYLLPKNHPLQIPLKNLFQTPNMFDSPREWHLSGFQVLDRVHRKLMVA RHPTVKNYLFKKFQNTVSAKKQLNNYLKRASGAKALSQFIIRNHINHIIVPKKWLYPLPKKFSDSKTKEQTYILIVEEMD ICEGGVDPMGEVALHYQHIQEELLKELCFVVFCFRGLDSMLHNMPFTYQNKITFIDTEKWKEKREGYLQRAMPFLRPESQ AYALEIFRALENQEIKLN >Mature_258_residues MKKTIIFSIYLIMVVSFCYLFPALNAREYEIKQYLLPKNHPLQIPLKNLFQTPNMFDSPREWHLSGFQVLDRVHRKLMVA RHPTVKNYLFKKFQNTVSAKKQLNNYLKRASGAKALSQFIIRNHINHIIVPKKWLYPLPKKFSDSKTKEQTYILIVEEMD ICEGGVDPMGEVALHYQHIQEELLKELCFVVFCFRGLDSMLHNMPFTYQNKITFIDTEKWKEKREGYLQRAMPFLRPESQ AYALEIFRALENQEIKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30664; Mature: 30664
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIIFSIYLIMVVSFCYLFPALNAREYEIKQYLLPKNHPLQIPLKNLFQTPNMFDSPR CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCH EWHLSGFQVLDRVHRKLMVARHPTVKNYLFKKFQNTVSAKKQLNNYLKRASGAKALSQFI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IRNHINHIIVPKKWLYPLPKKFSDSKTKEQTYILIVEEMDICEGGVDPMGEVALHYQHIQ HHHCCCEEECCHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHH EELLKELCFVVFCFRGLDSMLHNMPFTYQNKITFIDTEKWKEKREGYLQRAMPFLRPESQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHH AYALEIFRALENQEIKLN HHHHHHHHHHCCCCEECC >Mature Secondary Structure MKKTIIFSIYLIMVVSFCYLFPALNAREYEIKQYLLPKNHPLQIPLKNLFQTPNMFDSPR CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCH EWHLSGFQVLDRVHRKLMVARHPTVKNYLFKKFQNTVSAKKQLNNYLKRASGAKALSQFI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IRNHINHIIVPKKWLYPLPKKFSDSKTKEQTYILIVEEMDICEGGVDPMGEVALHYQHIQ HHHCCCEEECCHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHH EELLKELCFVVFCFRGLDSMLHNMPFTYQNKITFIDTEKWKEKREGYLQRAMPFLRPESQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHH AYALEIFRALENQEIKLN HHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA