Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447189

Identifier: 46447189

GI number: 46447189

Start: 1861286

End: 1861846

Strand: Direct

Name: 46447189

Synonym: pc1555

Alternate gene names: NA

Gene position: 1861286-1861846 (Clockwise)

Preceding gene: 46447188

Following gene: 46447195

Centisome position: 77.09

GC content: 36.9

Gene sequence:

>561_bases
ATGAAAATGTTATCAAAAACTGTACTGACTTCTATTTTATCGACTTTAGTTGCTGCTAATGTAATGGCTCAATGTTCTTC
AAGTGGATATCCGTGGAGTAGCCATAAACGCTGTTATGGTTCATCTCAACAGCAACGTGAATCTTACCATGCTCCAATGG
ATCAAAATTGTTTAAAAGGATATCCATGGGGTAGCTATAAACGCTCTCATGGCTCACCTCAACAACAGGGTCCCTACAAT
GCTCCAAATGATCAAGGCGACTACTATCAATACTATAATGGAAACGCTTATTACCATGACTTTGACGGTCATGGAGTGCA
CAAATATCCAACTTATGGTGATCATCCAGAATTTAATCCAGGTTATGACCGTCCAATAGACCGTAATTACCAAGGGTTTA
ATGAGAATCATGGGCATCAAAATAGCACTGATCAAGCAATTGCTTTTGAAGATCTACAAGGAAACTATAATCCTGATGAT
CTAAATAAGAATAATCCCTCTTATAGTCAAACGAATGAAGTAAATCAAAACATAAATTCATCGACACAAAAAGCTCATTA
A

Upstream 100 bases:

>100_bases
AAATTCAATATACACAAAATCTCAAATCATTTTGCTCATGCTGTAATTTTAACCGTTTTCCAATCTAGCAACATTTAAGA
CAAAACATAAGGAGATTTGT

Downstream 100 bases:

>100_bases
TACTTAGCTTTAGCTTGATAACGTCCAGACCACACAAAATTTTATTTGTGTGGTCTTTTTTTTATAAACATTGATTTCTT
ACAAACAGCTTTATTTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKMLSKTVLTSILSTLVAANVMAQCSSSGYPWSSHKRCYGSSQQQRESYHAPMDQNCLKGYPWGSYKRSHGSPQQQGPYN
APNDQGDYYQYYNGNAYYHDFDGHGVHKYPTYGDHPEFNPGYDRPIDRNYQGFNENHGHQNSTDQAIAFEDLQGNYNPDD
LNKNNPSYSQTNEVNQNINSSTQKAH

Sequences:

>Translated_186_residues
MKMLSKTVLTSILSTLVAANVMAQCSSSGYPWSSHKRCYGSSQQQRESYHAPMDQNCLKGYPWGSYKRSHGSPQQQGPYN
APNDQGDYYQYYNGNAYYHDFDGHGVHKYPTYGDHPEFNPGYDRPIDRNYQGFNENHGHQNSTDQAIAFEDLQGNYNPDD
LNKNNPSYSQTNEVNQNINSSTQKAH
>Mature_186_residues
MKMLSKTVLTSILSTLVAANVMAQCSSSGYPWSSHKRCYGSSQQQRESYHAPMDQNCLKGYPWGSYKRSHGSPQQQGPYN
APNDQGDYYQYYNGNAYYHDFDGHGVHKYPTYGDHPEFNPGYDRPIDRNYQGFNENHGHQNSTDQAIAFEDLQGNYNPDD
LNKNNPSYSQTNEVNQNINSSTQKAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21179; Mature: 21179

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLSKTVLTSILSTLVAANVMAQCSSSGYPWSSHKRCYGSSQQQRESYHAPMDQNCLKG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHCC
YPWGSYKRSHGSPQQQGPYNAPNDQGDYYQYYNGNAYYHDFDGHGVHKYPTYGDHPEFNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
GYDRPIDRNYQGFNENHGHQNSTDQAIAFEDLQGNYNPDDLNKNNPSYSQTNEVNQNINS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
STQKAH
CCCCCC
>Mature Secondary Structure
MKMLSKTVLTSILSTLVAANVMAQCSSSGYPWSSHKRCYGSSQQQRESYHAPMDQNCLKG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHCC
YPWGSYKRSHGSPQQQGPYNAPNDQGDYYQYYNGNAYYHDFDGHGVHKYPTYGDHPEFNP
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
GYDRPIDRNYQGFNENHGHQNSTDQAIAFEDLQGNYNPDDLNKNNPSYSQTNEVNQNINS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
STQKAH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA