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The map label for this gene is 46447188

Identifier: 46447188

GI number: 46447188

Start: 1860232

End: 1861068

Strand: Direct

Name: 46447188

Synonym: pc1554

Alternate gene names: NA

Gene position: 1860232-1861068 (Clockwise)

Preceding gene: 46447187

Following gene: 46447189

Centisome position: 77.05

GC content: 34.53

Gene sequence:

>837_bases
ATGCAAATATTTTACAAATTTATCTTTTCCGCTTTAGTCGTAGGCAGTTTATGTAATCAGGTTGAAGCCGATTGCCTCCG
CTGCAAAAAAATTGAGGCTGAACGTGCAAAAGAACAAGCTGAACATCCTCAACAAGTCGGTTACTATGACGATCACATTA
GCATGGTAGATCAACCTAAACTCTCTAGCTCATCAAACTCTACCACTATAAGCACGAATCCCAAATCAACAAATACTAAT
AAGCTTACTGCTGCCGCACCAACCTCAGAACAAGTTGAAAATCAACCAAATGTGACGGGCAATCTTTACATTAGTGAAAA
TGTCTATCAAGATTCTAAGAATCCACAAAACAAAATTGTGGAAGAAACAATCGAAGAAAGTATTCAAATTCCTCAAGATC
AGCTCTCAGTTAATTCACCTTCTCAATTCACTACACAAACTGCAAATTCACAAACTTTTTCTACTTTGGTAAATCTCTTA
AAAACGAAGGATTTGCTAACAACACTCAGTGGCTCTTTTACAATTTTTATTCCCTCTAATGAAGCTTTGCGTGCTCTTCC
ACCAGAAACTTTAAAAAATTTATTCATCCCTGAAAATAAAGAACAATTATCTAATTGGATAAGCAATCACATCGTTCCAG
CAAAAATCATTAAAAAAGATATTAAAAGTATGCAAGTGAAAGCTTTGAGTGGTAAGGATTTAGATATTTCTGTCAACGGA
GATATATTAACAGTGAATGGTGTTAAAGTTGTTCGAACTGAAACTGCTAACGATGATGGTGTGATGTATGTAATTGATCA
AGTTTTATTTTTAAGTCCTATAGACTCCGTAAAATAA

Upstream 100 bases:

>100_bases
ATGGCTAGGTTTTAATTTAGTTTAAAATAATTTTTATGAATGTATAATCCAATTTAGCTCATTTAAGACAAAAAAACAGC
ATATTAGGGGGATCTTCGTT

Downstream 100 bases:

>100_bases
TAAACATTTGCCTCATCTTTTAGATTTTCCTTTATTAAAAAAAAACAATGAGGCATGAATGGAGTGATTTCGCATTTAGT
TTATTCAATTTTCGGAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MQIFYKFIFSALVVGSLCNQVEADCLRCKKIEAERAKEQAEHPQQVGYYDDHISMVDQPKLSSSSNSTTISTNPKSTNTN
KLTAAAPTSEQVENQPNVTGNLYISENVYQDSKNPQNKIVEETIEESIQIPQDQLSVNSPSQFTTQTANSQTFSTLVNLL
KTKDLLTTLSGSFTIFIPSNEALRALPPETLKNLFIPENKEQLSNWISNHIVPAKIIKKDIKSMQVKALSGKDLDISVNG
DILTVNGVKVVRTETANDDGVMYVIDQVLFLSPIDSVK

Sequences:

>Translated_278_residues
MQIFYKFIFSALVVGSLCNQVEADCLRCKKIEAERAKEQAEHPQQVGYYDDHISMVDQPKLSSSSNSTTISTNPKSTNTN
KLTAAAPTSEQVENQPNVTGNLYISENVYQDSKNPQNKIVEETIEESIQIPQDQLSVNSPSQFTTQTANSQTFSTLVNLL
KTKDLLTTLSGSFTIFIPSNEALRALPPETLKNLFIPENKEQLSNWISNHIVPAKIIKKDIKSMQVKALSGKDLDISVNG
DILTVNGVKVVRTETANDDGVMYVIDQVLFLSPIDSVK
>Mature_278_residues
MQIFYKFIFSALVVGSLCNQVEADCLRCKKIEAERAKEQAEHPQQVGYYDDHISMVDQPKLSSSSNSTTISTNPKSTNTN
KLTAAAPTSEQVENQPNVTGNLYISENVYQDSKNPQNKIVEETIEESIQIPQDQLSVNSPSQFTTQTANSQTFSTLVNLL
KTKDLLTTLSGSFTIFIPSNEALRALPPETLKNLFIPENKEQLSNWISNHIVPAKIIKKDIKSMQVKALSGKDLDISVNG
DILTVNGVKVVRTETANDDGVMYVIDQVLFLSPIDSVK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 30770; Mature: 30770

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIFYKFIFSALVVGSLCNQVEADCLRCKKIEAERAKEQAEHPQQVGYYDDHISMVDQPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCC
LSSSSNSTTISTNPKSTNTNKLTAAAPTSEQVENQPNVTGNLYISENVYQDSKNPQNKIV
CCCCCCCCEEECCCCCCCCCEEEEECCCHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHH
EETIEESIQIPQDQLSVNSPSQFTTQTANSQTFSTLVNLLKTKDLLTTLSGSFTIFIPSN
HHHHHHHHCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
EALRALPPETLKNLFIPENKEQLSNWISNHIVPAKIIKKDIKSMQVKALSGKDLDISVNG
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCEEEEECC
DILTVNGVKVVRTETANDDGVMYVIDQVLFLSPIDSVK
CEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQIFYKFIFSALVVGSLCNQVEADCLRCKKIEAERAKEQAEHPQQVGYYDDHISMVDQPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCC
LSSSSNSTTISTNPKSTNTNKLTAAAPTSEQVENQPNVTGNLYISENVYQDSKNPQNKIV
CCCCCCCCEEECCCCCCCCCEEEEECCCHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHH
EETIEESIQIPQDQLSVNSPSQFTTQTANSQTFSTLVNLLKTKDLLTTLSGSFTIFIPSN
HHHHHHHHCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
EALRALPPETLKNLFIPENKEQLSNWISNHIVPAKIIKKDIKSMQVKALSGKDLDISVNG
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCEEEEECC
DILTVNGVKVVRTETANDDGVMYVIDQVLFLSPIDSVK
CEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]