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The map label for this gene is exbB [C]

Identifier: 46447181

GI number: 46447181

Start: 1854520

End: 1855245

Strand: Direct

Name: exbB [C]

Synonym: pc1547

Alternate gene names: 46447181

Gene position: 1854520-1855245 (Clockwise)

Preceding gene: 46447180

Following gene: 46447182

Centisome position: 76.81

GC content: 34.02

Gene sequence:

>726_bases
ATGCTACCTCGAAAAAGGGGGGCGAATGGAGCAAAAAAGCAAAAGAAAAAATGGAAAAAGATTATGCCTATTGACTATTT
ATTGTTTGAACCCTGTTTAGCAAATCTATTTTTTTATGGCTCTAATTGGAACATTATTTTATTAATCATCATTGGCTGCT
CAATTCTAAGCGTAACGATTTTTATTGAAAGATTGATGCAAATACAAAAATCAGAAATTGATACTAATCAATTTATTATC
TCTATGAGAAAAACAATTAAAGAAGGAAATATTGTTGAAGCTATTCAAATTTGTGAAAAAACTGGCGGAACAATTGCTAC
TATTATCAAAGCAGGATTGATCAAACATAATCGTGATAAAGAGCAAATTGAATCAGCCATGGAAATTTCAGGGCTTGTAG
AAATTGCCCGTCTTGAGAGAAACGCCAAAATTTTATCTATTATTGCTTACATTGCACCTTTAATTGGCCTGCTAGGAACT
GTTTTAGGATTTATTCAAGCTTTTTCAGAAATGCGTTTAAGTGGACTTGTAGATATTTCTGCCACAAGGATTGGAGAGGC
TATGGAATATGCTCTAGTTACAACCGCGGCTGGACTGGTAGTGGCAATCCCTTCTGTAATAGCTTATAATTATTTGGTGA
GTAGGGTTGAAGGATTTGTTTTAGAAATTCAAACAGCCTCTGCAGAAATTGTTGATCTCCTTTTAGATCGTGAAGAGGAG
TTTTAA

Upstream 100 bases:

>100_bases
AATGACGAAGCCATTTCAAGTTTACGGGTTAAAGCTATGTATTTAAGAGCAGATATTTATACTCAACAAGGCAGACCTGA
GCTTGCCTTGAAGCAATTGG

Downstream 100 bases:

>100_bases
TGAAATTTAAAACTCGCTTAAAGTCCTCGAATGCATTAATTGATTTAACACCCCTTGTTGATGTCATTTTCTTGATGCTT
ATATTTTTTATCGTGACCTC

Product: putative biopolymer transport protein exbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLPRKRGANGAKKQKKKWKKIMPIDYLLFEPCLANLFFYGSNWNIILLIIIGCSILSVTIFIERLMQIQKSEIDTNQFII
SMRKTIKEGNIVEAIQICEKTGGTIATIIKAGLIKHNRDKEQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGT
VLGFIQAFSEMRLSGLVDISATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGFVLEIQTASAEIVDLLLDREEE
F

Sequences:

>Translated_241_residues
MLPRKRGANGAKKQKKKWKKIMPIDYLLFEPCLANLFFYGSNWNIILLIIIGCSILSVTIFIERLMQIQKSEIDTNQFII
SMRKTIKEGNIVEAIQICEKTGGTIATIIKAGLIKHNRDKEQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGT
VLGFIQAFSEMRLSGLVDISATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGFVLEIQTASAEIVDLLLDREEE
F
>Mature_241_residues
MLPRKRGANGAKKQKKKWKKIMPIDYLLFEPCLANLFFYGSNWNIILLIIIGCSILSVTIFIERLMQIQKSEIDTNQFII
SMRKTIKEGNIVEAIQICEKTGGTIATIIKAGLIKHNRDKEQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGT
VLGFIQAFSEMRLSGLVDISATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGFVLEIQTASAEIVDLLLDREEE
F

Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26793; Mature: 26793

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPRKRGANGAKKQKKKWKKIMPIDYLLFEPCLANLFFYGSNWNIILLIIIGCSILSVTI
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHH
FIERLMQIQKSEIDTNQFIISMRKTIKEGNIVEAIQICEKTGGTIATIIKAGLIKHNRDK
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
EQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGTVLGFIQAFSEMRLSGLVDIS
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGFVLEIQTASAEIVDLLLDREEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCC
F
C
>Mature Secondary Structure
MLPRKRGANGAKKQKKKWKKIMPIDYLLFEPCLANLFFYGSNWNIILLIIIGCSILSVTI
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHH
FIERLMQIQKSEIDTNQFIISMRKTIKEGNIVEAIQICEKTGGTIATIIKAGLIKHNRDK
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
EQIESAMEISGLVEIARLERNAKILSIIAYIAPLIGLLGTVLGFIQAFSEMRLSGLVDIS
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRIGEAMEYALVTTAAGLVVAIPSVIAYNYLVSRVEGFVLEIQTASAEIVDLLLDREEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]