Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447106

Identifier: 46447106

GI number: 46447106

Start: 1746893

End: 1747138

Strand: Direct

Name: 46447106

Synonym: pc1472

Alternate gene names: NA

Gene position: 1746893-1747138 (Clockwise)

Preceding gene: 46447105

Following gene: 46447107

Centisome position: 72.35

GC content: 31.71

Gene sequence:

>246_bases
GTGATTATGAGTGCGCACAAAGATGTTATTCGTTTTACATTTGATTGCCCTATAGATTTGCATGCTATTGCAAAAATGAA
AGCTTCAGCTTTGCATCAAAGTATGAAAGATTATTTAATTGGACTTTTAGCTAAAGACGCTTTAGAAAATCCACCAAAAT
ATTTGGATAGTAAATCTTTCAAAGAACAACTTAAAAATATTCTTCAAGATGATGCTGAACTCATGCAAAAGTTATCCGAT
CGATGA

Upstream 100 bases:

>100_bases
CTTTATCATCCAAATTTCGAGCTGAACACTATAGAAAGTTGAATCTTATTGTCGTAAATAAGATAATAAGATATAATAAA
AGTGTCCCCAAAATTAGGAG

Downstream 100 bases:

>100_bases
TTTACCTATCTTTTGAACAAATTATTGAACTACATGATGCTCTTATTGACAAATTTGGTGGGCTTCTTGGAATACGAGAG
AGAGGGTTATTGGAATCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSFKEQLKNILQDDAELMQKLSD
R

Sequences:

>Translated_81_residues
MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSFKEQLKNILQDDAELMQKLSD
R
>Mature_81_residues
MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSFKEQLKNILQDDAELMQKLSD
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9278; Mature: 9278

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSF
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH
KEQLKNILQDDAELMQKLSDR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSF
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH
KEQLKNILQDDAELMQKLSDR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA