| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447106
Identifier: 46447106
GI number: 46447106
Start: 1746893
End: 1747138
Strand: Direct
Name: 46447106
Synonym: pc1472
Alternate gene names: NA
Gene position: 1746893-1747138 (Clockwise)
Preceding gene: 46447105
Following gene: 46447107
Centisome position: 72.35
GC content: 31.71
Gene sequence:
>246_bases GTGATTATGAGTGCGCACAAAGATGTTATTCGTTTTACATTTGATTGCCCTATAGATTTGCATGCTATTGCAAAAATGAA AGCTTCAGCTTTGCATCAAAGTATGAAAGATTATTTAATTGGACTTTTAGCTAAAGACGCTTTAGAAAATCCACCAAAAT ATTTGGATAGTAAATCTTTCAAAGAACAACTTAAAAATATTCTTCAAGATGATGCTGAACTCATGCAAAAGTTATCCGAT CGATGA
Upstream 100 bases:
>100_bases CTTTATCATCCAAATTTCGAGCTGAACACTATAGAAAGTTGAATCTTATTGTCGTAAATAAGATAATAAGATATAATAAA AGTGTCCCCAAAATTAGGAG
Downstream 100 bases:
>100_bases TTTACCTATCTTTTGAACAAATTATTGAACTACATGATGCTCTTATTGACAAATTTGGTGGGCTTCTTGGAATACGAGAG AGAGGGTTATTGGAATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSFKEQLKNILQDDAELMQKLSD R
Sequences:
>Translated_81_residues MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSFKEQLKNILQDDAELMQKLSD R >Mature_81_residues MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSFKEQLKNILQDDAELMQKLSD R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9278; Mature: 9278
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSF CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH KEQLKNILQDDAELMQKLSDR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIMSAHKDVIRFTFDCPIDLHAIAKMKASALHQSMKDYLIGLLAKDALENPPKYLDSKSF CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH KEQLKNILQDDAELMQKLSDR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA