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The map label for this gene is 46447087

Identifier: 46447087

GI number: 46447087

Start: 1725568

End: 1725891

Strand: Direct

Name: 46447087

Synonym: pc1453

Alternate gene names: NA

Gene position: 1725568-1725891 (Clockwise)

Preceding gene: 46447086

Following gene: 46447088

Centisome position: 71.47

GC content: 35.8

Gene sequence:

>324_bases
ATGTTGAAATACAAAAACTACACAGGCTTTGTTCAATTTGACGATGAAGCAATGATTTTTCATGGAGAAGTCCTAGGACT
TCGAGATGTTATTACATTTCGCGGAACAACACCTGAAGAAATAAAAAAAGAATTTGAAATTTCTATTGATGGATACTTGG
ATTGGTGTAAAGAGCTAGGCCAAGAACCAGAAAAACCATTTTCAGGAAACATCCATTTACGGCTACAACCTGATTTGCAT
GCAAAACTTGCCGCTGAGGCAAAATTCAACGGAATTAGCCTCAATAACTATATTAGCCAGACTTTAAAACAAGCTATACA
GTAA

Upstream 100 bases:

>100_bases
GTGTTCGTGCTTATTTCCATCGACCACATCTTCAAAAAGAAATTGATAAGGGTGCTTTAGTTTCCGCCAAAAAGTTTTTA
GAAAATGCAGGAGTAAAACC

Downstream 100 bases:

>100_bases
AAAAAAATTTTTTAAGATCTTTTCAGCAGAGGTAAGGATTACTCAGCACTCAAAGCAAACTTTCTCCTAGTAAGGTATTC
ATTCAGTTTTCCAAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: HicB Protein; HicB-Related Protein; Xin-Antitoxin System Antitoxin Component HicB Family; Hif-Contiguous Protein B; Xin-Antitoxin System Protein HicB; HicB Family; HicB-Like Protein; Pilus Related Protein HicB

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLKYKNYTGFVQFDDEAMIFHGEVLGLRDVITFRGTTPEEIKKEFEISIDGYLDWCKELGQEPEKPFSGNIHLRLQPDLH
AKLAAEAKFNGISLNNYISQTLKQAIQ

Sequences:

>Translated_107_residues
MLKYKNYTGFVQFDDEAMIFHGEVLGLRDVITFRGTTPEEIKKEFEISIDGYLDWCKELGQEPEKPFSGNIHLRLQPDLH
AKLAAEAKFNGISLNNYISQTLKQAIQ
>Mature_107_residues
MLKYKNYTGFVQFDDEAMIFHGEVLGLRDVITFRGTTPEEIKKEFEISIDGYLDWCKELGQEPEKPFSGNIHLRLQPDLH
AKLAAEAKFNGISLNNYISQTLKQAIQ

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12293; Mature: 12293

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYKNYTGFVQFDDEAMIFHGEVLGLRDVITFRGTTPEEIKKEFEISIDGYLDWCKELG
CCCCCCCCEEEEECCCEEEEECCCCCHHHEEEECCCCHHHHHHHHEEEECHHHHHHHHHC
QEPEKPFSGNIHLRLQPDLHAKLAAEAKFNGISLNNYISQTLKQAIQ
CCCCCCCCCCEEEEECCCCCCCEECCCCCCCEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKYKNYTGFVQFDDEAMIFHGEVLGLRDVITFRGTTPEEIKKEFEISIDGYLDWCKELG
CCCCCCCCEEEEECCCEEEEECCCCCHHHEEEECCCCHHHHHHHHEEEECHHHHHHHHHC
QEPEKPFSGNIHLRLQPDLHAKLAAEAKFNGISLNNYISQTLKQAIQ
CCCCCCCCCCEEEEECCCCCCCEECCCCCCCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA