| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447086
Identifier: 46447086
GI number: 46447086
Start: 1723987
End: 1725021
Strand: Direct
Name: 46447086
Synonym: pc1452
Alternate gene names: NA
Gene position: 1723987-1725021 (Clockwise)
Preceding gene: 46447082
Following gene: 46447087
Centisome position: 71.4
GC content: 30.24
Gene sequence:
>1035_bases TTGAGAGGTCTTTGGGGGGATACTTGGATATGCCCTAATCCAAACTGCGGTTACGAAAATTATAATAAGGTAAATTTTTG TGGAGTTTGCGGAACTAAAAAAAAAGCCCTAGTGCGAAAATTATTAGATGAGCAAAAAAATGAGGTAAGAATGATTCATA TTTTTAAAAAACTATTCATATGCAAATTGATTGTTTTTACCTTTTTTGCTCATCTATTATTACATGCCCATTCAGTGACA GAAATTTTAAAATCAATACCAGAAGACGATAGGGAAGTCTTAAGTAGACTTTTCTATCAACTGATGAACAATGATCTCTT CGCTTATACCCTATTTGGAGATAAGCCTGTTTCAGTCACTGCAAATTTTATCTTAACCCCTTACGGAAATATTTTTTGCC GGATGAAATGTGGCGGTTATTTTTGGGAAAAATGGAAGGTATGGAAAAAATACGAACATCTGTTTCCAATGAAAAATTAT CTTTTAATTGAAGAATCTGCTCAAACAAATACTAAAAACATTTTTTTTCTTAATAAAAAATGGTTTGTAAAAACTGTTTG TCAACACCTAAAAATTTTTGAAACAATTTTAGACGGAAATATCATACCTAAAAACTTATTGAATAAAATTGAAAAAAGTC AAAAATTTTTTTCTGTAATTAAAGAAAACCCAATTCTCCTCGGTATTTTGCTCGGCTATGGGCAACATAATGCAGAATTA TATTCTAGAAGAAATGATTTAAGACATTTCATTGATTTTGAACAAATTCCTAAAATTCCCTATAAAATGCTCAAACCTTC CAAACAGTTTGTTTCCCTAGAAGAAGAATACCAATATCTGAATTCTAGGTTAAAGCCTTTTGATGATTATCATTACTTAC CCTTAATTATTTCCCCTGTGCACTTCGTTGCTGATTATAGCCATTCTCAAACAAAAGAACTTCAAAAAAAATACCGAAAA TTAAGAGGTAAAATATCTGCTATTTATTCCCAAGGTGATTTTTTAGAAATAACACTCAATGAAATGACTCGATAA
Upstream 100 bases:
>100_bases ACTAAGCAAATTTTTCTAAATTTTAAAGGAAAATTACTCCCTATTCATAGTCTTTTAACTGGTGTATACGGTATTTTTAC ACCTTTAAAGGATATACTTC
Downstream 100 bases:
>100_bases AATTTTATTTTAATAGTCCTAAATATTTTTGTAAGGATATTAAAATGCTAAGTTGTTTTAGATTTTTCTGCAGAAAGCTA TTTTTGAATAAAACCAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFICKLIVFTFFAHLLLHAHSVT EILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVTANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNY LLIEESAQTNTKNIFFLNKKWFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPVHFVADYSHSQTKELQKKYRK LRGKISAIYSQGDFLEITLNEMTR
Sequences:
>Translated_344_residues MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFICKLIVFTFFAHLLLHAHSVT EILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVTANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNY LLIEESAQTNTKNIFFLNKKWFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPVHFVADYSHSQTKELQKKYRK LRGKISAIYSQGDFLEITLNEMTR >Mature_344_residues MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFICKLIVFTFFAHLLLHAHSVT EILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVTANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNY LLIEESAQTNTKNIFFLNKKWFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPVHFVADYSHSQTKELQKKYRK LRGKISAIYSQGDFLEITLNEMTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40864; Mature: 40864
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS01358 ZF_RANBP2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFI CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKLIVFTFFAHLLLHAHSVTEILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE ANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNYLLIEESAQTNTKNIFFLNKK EEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCH WFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPV HHHHHHHHHHHCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH HFVADYSHSQTKELQKKYRKLRGKISAIYSQGDFLEITLNEMTR HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC >Mature Secondary Structure MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFI CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKLIVFTFFAHLLLHAHSVTEILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE ANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNYLLIEESAQTNTKNIFFLNKK EEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCH WFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPV HHHHHHHHHHHCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH HFVADYSHSQTKELQKKYRKLRGKISAIYSQGDFLEITLNEMTR HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA