Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447086

Identifier: 46447086

GI number: 46447086

Start: 1723987

End: 1725021

Strand: Direct

Name: 46447086

Synonym: pc1452

Alternate gene names: NA

Gene position: 1723987-1725021 (Clockwise)

Preceding gene: 46447082

Following gene: 46447087

Centisome position: 71.4

GC content: 30.24

Gene sequence:

>1035_bases
TTGAGAGGTCTTTGGGGGGATACTTGGATATGCCCTAATCCAAACTGCGGTTACGAAAATTATAATAAGGTAAATTTTTG
TGGAGTTTGCGGAACTAAAAAAAAAGCCCTAGTGCGAAAATTATTAGATGAGCAAAAAAATGAGGTAAGAATGATTCATA
TTTTTAAAAAACTATTCATATGCAAATTGATTGTTTTTACCTTTTTTGCTCATCTATTATTACATGCCCATTCAGTGACA
GAAATTTTAAAATCAATACCAGAAGACGATAGGGAAGTCTTAAGTAGACTTTTCTATCAACTGATGAACAATGATCTCTT
CGCTTATACCCTATTTGGAGATAAGCCTGTTTCAGTCACTGCAAATTTTATCTTAACCCCTTACGGAAATATTTTTTGCC
GGATGAAATGTGGCGGTTATTTTTGGGAAAAATGGAAGGTATGGAAAAAATACGAACATCTGTTTCCAATGAAAAATTAT
CTTTTAATTGAAGAATCTGCTCAAACAAATACTAAAAACATTTTTTTTCTTAATAAAAAATGGTTTGTAAAAACTGTTTG
TCAACACCTAAAAATTTTTGAAACAATTTTAGACGGAAATATCATACCTAAAAACTTATTGAATAAAATTGAAAAAAGTC
AAAAATTTTTTTCTGTAATTAAAGAAAACCCAATTCTCCTCGGTATTTTGCTCGGCTATGGGCAACATAATGCAGAATTA
TATTCTAGAAGAAATGATTTAAGACATTTCATTGATTTTGAACAAATTCCTAAAATTCCCTATAAAATGCTCAAACCTTC
CAAACAGTTTGTTTCCCTAGAAGAAGAATACCAATATCTGAATTCTAGGTTAAAGCCTTTTGATGATTATCATTACTTAC
CCTTAATTATTTCCCCTGTGCACTTCGTTGCTGATTATAGCCATTCTCAAACAAAAGAACTTCAAAAAAAATACCGAAAA
TTAAGAGGTAAAATATCTGCTATTTATTCCCAAGGTGATTTTTTAGAAATAACACTCAATGAAATGACTCGATAA

Upstream 100 bases:

>100_bases
ACTAAGCAAATTTTTCTAAATTTTAAAGGAAAATTACTCCCTATTCATAGTCTTTTAACTGGTGTATACGGTATTTTTAC
ACCTTTAAAGGATATACTTC

Downstream 100 bases:

>100_bases
AATTTTATTTTAATAGTCCTAAATATTTTTGTAAGGATATTAAAATGCTAAGTTGTTTTAGATTTTTCTGCAGAAAGCTA
TTTTTGAATAAAACCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFICKLIVFTFFAHLLLHAHSVT
EILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVTANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNY
LLIEESAQTNTKNIFFLNKKWFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL
YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPVHFVADYSHSQTKELQKKYRK
LRGKISAIYSQGDFLEITLNEMTR

Sequences:

>Translated_344_residues
MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFICKLIVFTFFAHLLLHAHSVT
EILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVTANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNY
LLIEESAQTNTKNIFFLNKKWFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL
YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPVHFVADYSHSQTKELQKKYRK
LRGKISAIYSQGDFLEITLNEMTR
>Mature_344_residues
MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFICKLIVFTFFAHLLLHAHSVT
EILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVTANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNY
LLIEESAQTNTKNIFFLNKKWFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL
YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPVHFVADYSHSQTKELQKKYRK
LRGKISAIYSQGDFLEITLNEMTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40864; Mature: 40864

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS01358 ZF_RANBP2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFI
CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CKLIVFTFFAHLLLHAHSVTEILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE
ANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNYLLIEESAQTNTKNIFFLNKK
EEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCH
WFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH
YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPV
HHHHHHHHHHHCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
HFVADYSHSQTKELQKKYRKLRGKISAIYSQGDFLEITLNEMTR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC
>Mature Secondary Structure
MRGLWGDTWICPNPNCGYENYNKVNFCGVCGTKKKALVRKLLDEQKNEVRMIHIFKKLFI
CCCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CKLIVFTFFAHLLLHAHSVTEILKSIPEDDREVLSRLFYQLMNNDLFAYTLFGDKPVSVT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE
ANFILTPYGNIFCRMKCGGYFWEKWKVWKKYEHLFPMKNYLLIEESAQTNTKNIFFLNKK
EEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCH
WFVKTVCQHLKIFETILDGNIIPKNLLNKIEKSQKFFSVIKENPILLGILLGYGQHNAEL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH
YSRRNDLRHFIDFEQIPKIPYKMLKPSKQFVSLEEEYQYLNSRLKPFDDYHYLPLIISPV
HHHHHHHHHHHCHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
HFVADYSHSQTKELQKKYRKLRGKISAIYSQGDFLEITLNEMTR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA