Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447081

Identifier: 46447081

GI number: 46447081

Start: 1718994

End: 1719326

Strand: Direct

Name: 46447081

Synonym: pc1447

Alternate gene names: NA

Gene position: 1718994-1719326 (Clockwise)

Preceding gene: 46447080

Following gene: 46447082

Centisome position: 71.2

GC content: 35.14

Gene sequence:

>333_bases
ATGTTTCAAAAATATTTCATGGCAATTTTATGTGCTTTAATGACATTCGCTTCTATTAGCTGTTTTGCCAAAGACACTGA
TTTAGGCTGTTTAATTTCTGTGGTTGATGGACATAAAGTGTATTTAAAGCCAGGCTCTGTTCAGATAGCTAAAAATGGAA
TTTTCATTAACGTAGCTGGTCAACTTAGAGCAATTAATCATTTAGAAATGGACGAACAAGGAGTTTATTTTGATATTTAC
AGACAAGCTGCACATGGGGATGTATGCCCAGCTTGCCATATTACTTTAGTTTGGGGATTATGTATGAACCCTGCATGTCC
AAGTAAAGGATAA

Upstream 100 bases:

>100_bases
CCTGGAAATGTTGCTGATGTCTCTATTGTAAATTAAATATTAATTGCATAATTAAAACTTTTTTAGATAAATTACCTACT
CTCAATAAATCGAGAACAAT

Downstream 100 bases:

>100_bases
AAAGTTACTACTCATAGAGACCAATGCTAAAACCATTATTTTTATATCTTATTTTGTTCTTTCCATTTTCAGGTTGGTCT
CATCCAAATCTTGATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFQKYFMAILCALMTFASISCFAKDTDLGCLISVVDGHKVYLKPGSVQIAKNGIFINVAGQLRAINHLEMDEQGVYFDIY
RQAAHGDVCPACHITLVWGLCMNPACPSKG

Sequences:

>Translated_110_residues
MFQKYFMAILCALMTFASISCFAKDTDLGCLISVVDGHKVYLKPGSVQIAKNGIFINVAGQLRAINHLEMDEQGVYFDIY
RQAAHGDVCPACHITLVWGLCMNPACPSKG
>Mature_110_residues
MFQKYFMAILCALMTFASISCFAKDTDLGCLISVVDGHKVYLKPGSVQIAKNGIFINVAGQLRAINHLEMDEQGVYFDIY
RQAAHGDVCPACHITLVWGLCMNPACPSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12046; Mature: 12046

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQKYFMAILCALMTFASISCFAKDTDLGCLISVVDGHKVYLKPGSVQIAKNGIFINVAG
CCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEECCCEEEECCCEEEEECC
QLRAINHLEMDEQGVYFDIYRQAAHGDVCPACHITLVWGLCMNPACPSKG
CEEECCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFQKYFMAILCALMTFASISCFAKDTDLGCLISVVDGHKVYLKPGSVQIAKNGIFINVAG
CCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCEEEEECCCEEEECCCEEEEECC
QLRAINHLEMDEQGVYFDIYRQAAHGDVCPACHITLVWGLCMNPACPSKG
CEEECCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA