Click here to switch to the map view.

The map label for this gene is 46447078

Identifier: 46447078

GI number: 46447078

Start: 1717137

End: 1717400

Strand: Direct

Name: 46447078

Synonym: pc1444

Alternate gene names: NA

Gene position: 1717137-1717400 (Clockwise)

Preceding gene: 46447077

Following gene: 46447079

Centisome position: 71.12

GC content: 31.44

Gene sequence:

>264_bases
TTGCCAACATTATTTTCATTTGTGAATTTAAAAGAATATTTAGAAGAATATCAGATAACCTATCGTGAATTTGCTGATAA
GCTTGGCATTCATTTGCATTCTCTAAAAAATATAGTATACGGCAAAAGAAAACCTGGTTTAAGGCTTGCCTTACAAATTG
AAGAGTGCATTAAGGGTAAAGTTTCTCCACGAGATTTAACTGACTATTTCAATACCATTCCTCAAAAAAAATCACAGCGA
AAATCTGTGAAAAAACAGATCTGA

Upstream 100 bases:

>100_bases
TTCTCACTTTGTTATCTAATAAAATTAGAAAAAAATGCTTCGGCGACATTCGGAGGCTCTAAAATAGCATGATTTATCAA
AGTAGTCAAAAAGACTACTT

Downstream 100 bases:

>100_bases
AAAATATAGAGAATTCTTTAGATGGCTTTTGAACCTCTACTTTTATCATGAACGAGTAAAATAGCCTCACCCCTTCCCTT
GGCATAAATTACCAACTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MPTLFSFVNLKEYLEEYQITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGKVSPRDLTDYFNTIPQKKSQR
KSVKKQI

Sequences:

>Translated_87_residues
MPTLFSFVNLKEYLEEYQITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGKVSPRDLTDYFNTIPQKKSQR
KSVKKQI
>Mature_86_residues
PTLFSFVNLKEYLEEYQITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGKVSPRDLTDYFNTIPQKKSQRK
SVKKQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10272; Mature: 10141

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLFSFVNLKEYLEEYQITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHCCC
VSPRDLTDYFNTIPQKKSQRKSVKKQI
CCCHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PTLFSFVNLKEYLEEYQITYREFADKLGIHLHSLKNIVYGKRKPGLRLALQIEECIKGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEHHHHHCCC
VSPRDLTDYFNTIPQKKSQRKSVKKQI
CCCHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA