| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447051
Identifier: 46447051
GI number: 46447051
Start: 1691799
End: 1693271
Strand: Direct
Name: 46447051
Synonym: pc1417
Alternate gene names: NA
Gene position: 1691799-1693271 (Clockwise)
Preceding gene: 46447050
Following gene: 46447052
Centisome position: 70.07
GC content: 31.36
Gene sequence:
>1473_bases ATGACTTCTATTCAACTGCATCAACTTCAACAACATTTTAGCATGCTCTTAGATCAAGTCGAGAATACATCTAATGAAGA TCTCAGTAAACGATTAAAACTAATTTGGGATAAAAGGGGTTGCATAGATGAAAAAAATGTCATGCAATTAATACGAATTG TAAAAAAATATGATACAACCTCTGGAAATTCAATTAAACAAATAATAGAAAAAATCAGAAAAAAAATATTTGATTTATCA ATTGGTGATGGAAAATGGTTTATCTACTCATTCGCGCGCGCTGGGGAGTTTGAAAAAGTTCGCGCTCTTATCAACATAGT CTCTACTGATGATGAGCTAAAAACTCTACTTACTAAACCTCAGATTCAATTCAATCAAAACGTTGTTGAATGTGCTATAC AAGGAAGAAATCAAGCCCTTATTGCTTATTTGAATTTGCCTTATCCTTTACTCACAAAAGAAATTATTTGTAAAAAAGGT GAAGACCCTAAACTTGAAGGGTTACTTTCGGGTATGTATACGTTAAATTTGAAAATAAACTATTGTATTGTTTATGAAGA TGTTAAATATCACAGTACAAATTGTTTTACTATAATAAATTCTTCCTTTCAAAAAAGACCTCTTATTTTTGCTTTTATAG AAAAAGAAAATAAACTTTATCCTCGTTTATTTTGGCTCAGCAAATCACAGGCTACTTGGAGAAGACTTGATAAAACCTTT AAAGATCATATTGGAAAAACAAGATCGGGTGAAGAAAGGTTGTTGATTCCTATTAGAATTAACCTACGCTTCTTTGAAAT CTTAAATGAACAGGATGATATTCAGCCTTTGGACGGAAGCCTGGGAAACGATTTTCTTCAGTATGTTGTAGCTAAAAGTG ATAAGGCTGTTAAAAAGACACCTAGAACAAAAGATAAAAAGTATCACATTGTACAAGATGAGCAAACACTTGTACAGGAT GAAGACAGTTCGGTACAGGATGAAAGTGGACCATTTTCACTAAAACCAAGGGAAACACCAGAAAATTTTTTTATAAATGG AATACCTGCAATTTCTTCTAAAAATGATTTTGAAGATAATGCAGTTAAGCCCAATTTCACTAAAGTTGAAAGATCGCAAG TTATAACAAGTGCTTTTTACGGTCGATTAAGAGCTAATGTTTTTTTGTCAAATGATGAAAACATTAGATTTTTATTTCTA CAAAATGATTTAGGACATGTATTTTTAGCAGGAGCTGAATTAATAAATAGTCCGATTACAAGACGAGGGATTAGAAAAAA ATGGGTAAAGCTAGGTTCTTTATCTCTTCCACTTAAAGAATATCAAAAACAATTTATTAATGAATTTATAAGTGATTCAG AAAAGGAAGAAATTCGACAAGGAGAACAGTTGACTTATGTTCAAACGTGGAATTACTTGAGAGAGATGCCTTGCATTCAA AATTATTATGCCATTCCTCGACAAATACAGTAA
Upstream 100 bases:
>100_bases TGTTATTTTGTAACATTCTATTTACATGTTTAGAATTGCCAAATAAATGATCTTTAAGTTGATAAGTAAACAATAACAAT AAAACAATTTGAGGAAAATT
Downstream 100 bases:
>100_bases ACGTTCTTCTTTGCATATCTAAACTCAAGCTGTTTGTATAAATTAGCCACCGTAATTTTTTTTAATTGCGGTTGGCTTTC TCTTCCAAGTAAAAAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTTSGNSIKQIIEKIRKKIFDLS IGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKPQIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKG EDPKLEGLLSGMYTLNLKINYCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKTPRTKDKKYHIVQDEQTLVQD EDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDNAVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFL QNDLGHVFLAGAELINSPITRRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ NYYAIPRQIQ
Sequences:
>Translated_490_residues MTSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTTSGNSIKQIIEKIRKKIFDLS IGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKPQIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKG EDPKLEGLLSGMYTLNLKINYCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKTPRTKDKKYHIVQDEQTLVQD EDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDNAVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFL QNDLGHVFLAGAELINSPITRRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ NYYAIPRQIQ >Mature_489_residues TSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTTSGNSIKQIIEKIRKKIFDLSI GDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKPQIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKGE DPKLEGLLSGMYTLNLKINYCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTFK DHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKTPRTKDKKYHIVQDEQTLVQDE DSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDNAVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFLQ NDLGHVFLAGAELINSPITRRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQN YYAIPRQIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57156; Mature: 57025
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTT CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC SGNSIKQIIEKIRKKIFDLSIGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKP CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHCCCHHHHHHHCCC QIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKGEDPKLEGLLSGMYTLNLKIN CHHHCCCCEEHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEE YCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF EEEEEECCEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHH KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKT HHHCCCCCCCCCEEEEEEEECEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC PRTKDKKYHIVQDEQTLVQDEDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDN CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC AVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFLQNDLGHVFLAGAELINSPIT CCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCEEEECHHHHCCCHH RRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHCCHHH NYYAIPRQIQ HHHCCCCCCC >Mature Secondary Structure TSIQLHQLQQHFSMLLDQVENTSNEDLSKRLKLIWDKRGCIDEKNVMQLIRIVKKYDTT CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC SGNSIKQIIEKIRKKIFDLSIGDGKWFIYSFARAGEFEKVRALINIVSTDDELKTLLTKP CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHCCCHHHHHHHCCC QIQFNQNVVECAIQGRNQALIAYLNLPYPLLTKEIICKKGEDPKLEGLLSGMYTLNLKIN CHHHCCCCEEHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHCCEEEEEEEEE YCIVYEDVKYHSTNCFTIINSSFQKRPLIFAFIEKENKLYPRLFWLSKSQATWRRLDKTF EEEEEECCEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHH KDHIGKTRSGEERLLIPIRINLRFFEILNEQDDIQPLDGSLGNDFLQYVVAKSDKAVKKT HHHCCCCCCCCCEEEEEEEECEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC PRTKDKKYHIVQDEQTLVQDEDSSVQDESGPFSLKPRETPENFFINGIPAISSKNDFEDN CCCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC AVKPNFTKVERSQVITSAFYGRLRANVFLSNDENIRFLFLQNDLGHVFLAGAELINSPIT CCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCEEEECHHHHCCCHH RRGIRKKWVKLGSLSLPLKEYQKQFINEFISDSEKEEIRQGEQLTYVQTWNYLREMPCIQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHCCHHH NYYAIPRQIQ HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA