Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447042

Identifier: 46447042

GI number: 46447042

Start: 1684227

End: 1684778

Strand: Direct

Name: 46447042

Synonym: pc1408

Alternate gene names: NA

Gene position: 1684227-1684778 (Clockwise)

Preceding gene: 46447041

Following gene: 46447045

Centisome position: 69.76

GC content: 34.24

Gene sequence:

>552_bases
ATGCGGCGTTCTAACCATCATGAAGAAAAAAAAGTCTTCAAAATCAATTGCAATTGGGAAGATATTGCCATCGCGATAAA
AATGCCTGAAACTGTATACAAGCGGAAAAAAGACAGAGCATTAAAAATTTTGGATGACGCTTACTTTGTGGCGAAAGAAT
TAGGTTATCTACAAGATTATTGGCGAGAAGAAGCTGTAGATACCTTAATTCTTAACGAACAAAAATATTTATCTTCCGAA
ATGAATTCGACTAAAGAAAAAACAGAACAAATAACCCATCAATTCTCACATAGTGCTCACTTTCTATGGAATTTCTTTAA
CGAAAAAAAACTACTCAATGACCCGAAATATAAAATTTCTGAGTCTTTGAAACCTTCTTATCTTCGAGAATTTGAAAACT
TATTACAAGCCTGGTCCAAAGAACATATCATGCAAGTAATTGACTGGGGATTACGTCTTAAGCTTTGGCACCATCGTCTA
AGTACCCCGGCTAAAATTAGACAAAATATCAGTGAAGCCATGAAAGAATTGAATAACTCGCTATTAGGATAA

Upstream 100 bases:

>100_bases
CCTACAATTGGCGAGAAGAAGTTCGTTCTGTTGTGGGAAGTCGAAAAGCTTCGCTTATACATTTCGCTTTCTTCTTTTTT
TACGTTATCAATATGAAATG

Downstream 100 bases:

>100_bases
TTACCTTATTGAATTACCACATGCGTAATTTTAAAAATTTCTCGATCCTTAAAAAGCGAAATTACAACAATAGAAAACTG
TAAAAGGAATAAAGGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRRSNHHEEKKVFKINCNWEDIAIAIKMPETVYKRKKDRALKILDDAYFVAKELGYLQDYWREEAVDTLILNEQKYLSSE
MNSTKEKTEQITHQFSHSAHFLWNFFNEKKLLNDPKYKISESLKPSYLREFENLLQAWSKEHIMQVIDWGLRLKLWHHRL
STPAKIRQNISEAMKELNNSLLG

Sequences:

>Translated_183_residues
MRRSNHHEEKKVFKINCNWEDIAIAIKMPETVYKRKKDRALKILDDAYFVAKELGYLQDYWREEAVDTLILNEQKYLSSE
MNSTKEKTEQITHQFSHSAHFLWNFFNEKKLLNDPKYKISESLKPSYLREFENLLQAWSKEHIMQVIDWGLRLKLWHHRL
STPAKIRQNISEAMKELNNSLLG
>Mature_183_residues
MRRSNHHEEKKVFKINCNWEDIAIAIKMPETVYKRKKDRALKILDDAYFVAKELGYLQDYWREEAVDTLILNEQKYLSSE
MNSTKEKTEQITHQFSHSAHFLWNFFNEKKLLNDPKYKISESLKPSYLREFENLLQAWSKEHIMQVIDWGLRLKLWHHRL
STPAKIRQNISEAMKELNNSLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22011; Mature: 22011

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSNHHEEKKVFKINCNWEDIAIAIKMPETVYKRKKDRALKILDDAYFVAKELGYLQDY
CCCCCCCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WREEAVDTLILNEQKYLSSEMNSTKEKTEQITHQFSHSAHFLWNFFNEKKLLNDPKYKIS
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ESLKPSYLREFENLLQAWSKEHIMQVIDWGLRLKLWHHRLSTPAKIRQNISEAMKELNNS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLG
CCC
>Mature Secondary Structure
MRRSNHHEEKKVFKINCNWEDIAIAIKMPETVYKRKKDRALKILDDAYFVAKELGYLQDY
CCCCCCCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WREEAVDTLILNEQKYLSSEMNSTKEKTEQITHQFSHSAHFLWNFFNEKKLLNDPKYKIS
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ESLKPSYLREFENLLQAWSKEHIMQVIDWGLRLKLWHHRLSTPAKIRQNISEAMKELNNS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA