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The map label for this gene is ftsY [H]

Identifier: 46446933

GI number: 46446933

Start: 1555569

End: 1556498

Strand: Direct

Name: ftsY [H]

Synonym: pc1299

Alternate gene names: 46446933

Gene position: 1555569-1556498 (Clockwise)

Preceding gene: 46446929

Following gene: 46446934

Centisome position: 64.43

GC content: 38.17

Gene sequence:

>930_bases
ATGGTAATGGATTATTTTAAATCGAGCTTTGCAAAAGTCAAATTAGCTCTTTCACGTGCAAGAAACCTTCTCAGTGACAA
ATTAAAATCAATTTTTCAAGGCAAAATTGATGAACATACTTTAGAGCAGCTTGAACAACTTTTATACGAAGCTGATTTTG
GTGTCAAAACTGCATCTGAGCTGACTGAAAAAATACGCGACTTACATCGCCAACACCCCAATTTGAAAACTGAAGATTAT
ATTGAAGCTTTAAAACAGCAATTAATTTCTTTAGTGAGTCAATATCCTTCCAACCTCCTCGAACTTACCTCTTCACAACT
GCCTCAAATTATCTTAATTGTTGGAGTCAATGGGAATGGAAAAACAACGTCCGTCGCAAAGTTAGCTTATCAATTTAAAC
AAAAGGGTAAAAAAGTCCTTGTTGCTGCCGCCGATACGTTTCGAGCCGCTGCCATCGAACAATTAGAGTTATGGGCTCAT
AAATTACACATAGAAATTGTCAAGGGTCATCCAAAAAGTGATCCTGCAGCTGTCGCTTTTGATGCAATTCAAGCAGCAAA
AGCAAGAAAGTGTGATTTGGTTATCATTGATACAGCAGGACGATTACATACCAAAACGCCCTTGATGCAAGAATTGGAAA
AAATAAAACGTTCTTGCCAAAAAGCTTCACAAACGGGACCCCATGAAACACTGTTAGTTTTAGACGCTACGACCGGCCAA
AATGCCATTGAGCAAGCTAAACAATTTCATCATTTTACCCCAATTACAGGACTTATTCTGACGAAATTAGATGGAACCGC
CAAAGGAGGAATCGTGATTGCTATCCAAAGAGAACTTGGCATTCCCGTCAAATTTATCGGAACAGGAGAAGGAGAAGAAG
ATCTTCAACCCTTCGATGTACAAACATTTGTTTCTAACCTTTTTGATTAA

Upstream 100 bases:

>100_bases
TGATAGGGCAAGCCAAATTAAGATCTTCACCTTTTTCTTTTTTATATGCTAAGCTTTTTTTTACTCATTTTATACATCAA
AGGAAGGATTCCAAGACAAC

Downstream 100 bases:

>100_bases
ATATGGCATATATTACTGTTGGTTATTTTACAGAAAACACTCCTTACGAAGAAGAAATTCGTCATTTGGCTGAAAGTTTA
GAACGATTTTATTTGCCAAT

Product: signal recognition particle

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MVMDYFKSSFAKVKLALSRARNLLSDKLKSIFQGKIDEHTLEQLEQLLYEADFGVKTASELTEKIRDLHRQHPNLKTEDY
IEALKQQLISLVSQYPSNLLELTSSQLPQIILIVGVNGNGKTTSVAKLAYQFKQKGKKVLVAAADTFRAAAIEQLELWAH
KLHIEIVKGHPKSDPAAVAFDAIQAAKARKCDLVIIDTAGRLHTKTPLMQELEKIKRSCQKASQTGPHETLLVLDATTGQ
NAIEQAKQFHHFTPITGLILTKLDGTAKGGIVIAIQRELGIPVKFIGTGEGEEDLQPFDVQTFVSNLFD

Sequences:

>Translated_309_residues
MVMDYFKSSFAKVKLALSRARNLLSDKLKSIFQGKIDEHTLEQLEQLLYEADFGVKTASELTEKIRDLHRQHPNLKTEDY
IEALKQQLISLVSQYPSNLLELTSSQLPQIILIVGVNGNGKTTSVAKLAYQFKQKGKKVLVAAADTFRAAAIEQLELWAH
KLHIEIVKGHPKSDPAAVAFDAIQAAKARKCDLVIIDTAGRLHTKTPLMQELEKIKRSCQKASQTGPHETLLVLDATTGQ
NAIEQAKQFHHFTPITGLILTKLDGTAKGGIVIAIQRELGIPVKFIGTGEGEEDLQPFDVQTFVSNLFD
>Mature_309_residues
MVMDYFKSSFAKVKLALSRARNLLSDKLKSIFQGKIDEHTLEQLEQLLYEADFGVKTASELTEKIRDLHRQHPNLKTEDY
IEALKQQLISLVSQYPSNLLELTSSQLPQIILIVGVNGNGKTTSVAKLAYQFKQKGKKVLVAAADTFRAAAIEQLELWAH
KLHIEIVKGHPKSDPAAVAFDAIQAAKARKCDLVIIDTAGRLHTKTPLMQELEKIKRSCQKASQTGPHETLLVLDATTGQ
NAIEQAKQFHHFTPITGLILTKLDGTAKGGIVIAIQRELGIPVKFIGTGEGEEDLQPFDVQTFVSNLFD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=272, Percent_Identity=33.0882352941176, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI226371618, Length=199, Percent_Identity=36.6834170854271, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI23308697, Length=236, Percent_Identity=31.7796610169492, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI295424842, Length=236, Percent_Identity=31.7796610169492, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI89061728, Length=139, Percent_Identity=33.0935251798561, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1789874, Length=302, Percent_Identity=44.7019867549669, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788963, Length=295, Percent_Identity=33.5593220338983, Blast_Score=166, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17539958, Length=200, Percent_Identity=33.5, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI193206261, Length=230, Percent_Identity=34.3478260869565, Blast_Score=114, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=199, Percent_Identity=40.7035175879397, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=30.5676855895196, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI17647949, Length=272, Percent_Identity=31.9852941176471, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24641198, Length=259, Percent_Identity=32.046332046332, Blast_Score=116, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N; PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 34233; Mature: 34233

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMDYFKSSFAKVKLALSRARNLLSDKLKSIFQGKIDEHTLEQLEQLLYEADFGVKTASE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH
LTEKIRDLHRQHPNLKTEDYIEALKQQLISLVSQYPSNLLELTSSQLPQIILIVGVNGNG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCC
KTTSVAKLAYQFKQKGKKVLVAAADTFRAAAIEQLELWAHKLHIEIVKGHPKSDPAAVAF
CHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHH
DAIQAAKARKCDLVIIDTAGRLHTKTPLMQELEKIKRSCQKASQTGPHETLLVLDATTGQ
HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
NAIEQAKQFHHFTPITGLILTKLDGTAKGGIVIAIQRELGIPVKFIGTGEGEEDLQPFDV
HHHHHHHHHHCCCCHHHHHHEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHH
QTFVSNLFD
HHHHHHHCC
>Mature Secondary Structure
MVMDYFKSSFAKVKLALSRARNLLSDKLKSIFQGKIDEHTLEQLEQLLYEADFGVKTASE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH
LTEKIRDLHRQHPNLKTEDYIEALKQQLISLVSQYPSNLLELTSSQLPQIILIVGVNGNG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCC
KTTSVAKLAYQFKQKGKKVLVAAADTFRAAAIEQLELWAHKLHIEIVKGHPKSDPAAVAF
CHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHH
DAIQAAKARKCDLVIIDTAGRLHTKTPLMQELEKIKRSCQKASQTGPHETLLVLDATTGQ
HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH
NAIEQAKQFHHFTPITGLILTKLDGTAKGGIVIAIQRELGIPVKFIGTGEGEEDLQPFDV
HHHHHHHHHHCCCCHHHHHHEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHH
QTFVSNLFD
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]