Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446920

Identifier: 46446920

GI number: 46446920

Start: 1541670

End: 1542728

Strand: Direct

Name: 46446920

Synonym: pc1286

Alternate gene names: NA

Gene position: 1541670-1542728 (Clockwise)

Preceding gene: 46446919

Following gene: 46446923

Centisome position: 63.85

GC content: 41.27

Gene sequence:

>1059_bases
ATGATTCTTCCAGCTGGTTTTAATACGAAGACAATTTACTTAGACGGGCGATTAAAAGCTGATTTGAAATGGAAAGGAGC
TCGCGAAGAAGCCTTAAAAGCCATTGAAGCTGGGGCCTATTTATTCTGGGATATCAATATTGGCTTAATGGATGATCTTC
CTTTTGCTCTGATTAACCAAACACAATATCTGTCTCTTTCTTTATCGCTTGAGCACTTTAGAGATTCTCTTTGGAAAGAA
TTTAAACATAAAACCATTGGAATTTCACTTTACAAAGGTTCTGCTGACTTTAGTTTAAAATTTCCTTGGGACGCGCATCA
AATTGAAAATTTAAAAGAGTGGATTGCTCATCTTTTTAAAGATGAAATCCAACTAAAAGAAGAAACCGGTGTGAGCGTTT
CCTCATTGGCTCACCTAACTGTAGCGGATTTCTGCCAAACCGAGCAAGGGCAACAACTCATTCGCCTTTTTTGCCGTGAT
GTTTCAATGGAATACATCTCACTTCTTATTTCTCGTTTACCTGACACTTTACCCGCTTATCTTTTTTTAGATGTCACTCA
TTTTGCAAACCATCCCCTTTATCAAATGCAGCTTCTTCACCCTGCCAGATTTGAACAATTCAACCTAGCGCTAAAAGGAT
TTACGCTCCCCTTTTTTGCTTGGGGTTGGCAATCACAAGCCACCTCTCTCGGCTACAGTGGCATTCACCCGCTTCCGATT
CCTCCCAATAATGTTGCCAGCATCGGCATTTGCATTCCCCCGCTATTCATTTCACGTCCCAGCCAATTTAAAGGTTTAGA
GCAAGCGCTTAAAGATCTTCTTGCACAAGCCATTCCTTTCAGACTCATCGCAGAGGAACATTTAATTACAGGCTGGGATG
GTTTAGATTATTTAATTTACACCCCTACTGGTTTGAGTGGACAAGGGAAAAGGAAACTGCAAGGCTTTTGTGCAGCCGGA
GGTACCGCCATTTCAACATCAGATCTCATCGGATTGGATTACGAAATCACCTACGAAACATTTATGGCTGCTCCTTCACC
TAAAAGCGAAGGCTTCTAA

Upstream 100 bases:

>100_bases
TGATTTTGAAGAACAGCCTGATCCATGTGAATTACAATGGAATCGCCCTTTTTATACTTTAAAAAATGAGCTCTTTATTC
CTGTTGTCCTTGAAGAATCA

Downstream 100 bases:

>100_bases
AACTACTTATAAGCCATCTAATCCGAGGACAAAATATTTTGTGCGGCCATTATAATTCCTGAATGCTTTATATTCACATC
CTGAGCAGCCATGCATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MILPAGFNTKTIYLDGRLKADLKWKGAREEALKAIEAGAYLFWDINIGLMDDLPFALINQTQYLSLSLSLEHFRDSLWKE
FKHKTIGISLYKGSADFSLKFPWDAHQIENLKEWIAHLFKDEIQLKEETGVSVSSLAHLTVADFCQTEQGQQLIRLFCRD
VSMEYISLLISRLPDTLPAYLFLDVTHFANHPLYQMQLLHPARFEQFNLALKGFTLPFFAWGWQSQATSLGYSGIHPLPI
PPNNVASIGICIPPLFISRPSQFKGLEQALKDLLAQAIPFRLIAEEHLITGWDGLDYLIYTPTGLSGQGKRKLQGFCAAG
GTAISTSDLIGLDYEITYETFMAAPSPKSEGF

Sequences:

>Translated_352_residues
MILPAGFNTKTIYLDGRLKADLKWKGAREEALKAIEAGAYLFWDINIGLMDDLPFALINQTQYLSLSLSLEHFRDSLWKE
FKHKTIGISLYKGSADFSLKFPWDAHQIENLKEWIAHLFKDEIQLKEETGVSVSSLAHLTVADFCQTEQGQQLIRLFCRD
VSMEYISLLISRLPDTLPAYLFLDVTHFANHPLYQMQLLHPARFEQFNLALKGFTLPFFAWGWQSQATSLGYSGIHPLPI
PPNNVASIGICIPPLFISRPSQFKGLEQALKDLLAQAIPFRLIAEEHLITGWDGLDYLIYTPTGLSGQGKRKLQGFCAAG
GTAISTSDLIGLDYEITYETFMAAPSPKSEGF
>Mature_352_residues
MILPAGFNTKTIYLDGRLKADLKWKGAREEALKAIEAGAYLFWDINIGLMDDLPFALINQTQYLSLSLSLEHFRDSLWKE
FKHKTIGISLYKGSADFSLKFPWDAHQIENLKEWIAHLFKDEIQLKEETGVSVSSLAHLTVADFCQTEQGQQLIRLFCRD
VSMEYISLLISRLPDTLPAYLFLDVTHFANHPLYQMQLLHPARFEQFNLALKGFTLPFFAWGWQSQATSLGYSGIHPLPI
PPNNVASIGICIPPLFISRPSQFKGLEQALKDLLAQAIPFRLIAEEHLITGWDGLDYLIYTPTGLSGQGKRKLQGFCAAG
GTAISTSDLIGLDYEITYETFMAAPSPKSEGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39583; Mature: 39583

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPAGFNTKTIYLDGRLKADLKWKGAREEALKAIEAGAYLFWDINIGLMDDLPFALINQ
CEECCCCCCEEEEECCEEEECEEECCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHCC
TQYLSLSLSLEHFRDSLWKEFKHKTIGISLYKGSADFSLKFPWDAHQIENLKEWIAHLFK
CEEEEEEEEHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHH
DEIQLKEETGVSVSSLAHLTVADFCQTEQGQQLIRLFCRDVSMEYISLLISRLPDTLPAY
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
LFLDVTHFANHPLYQMQLLHPARFEQFNLALKGFTLPFFAWGWQSQATSLGYSGIHPLPI
HEEEEHHHCCCCEEEEEECCCCCHHHHEEEEECCCCCEEEECCCCHHHHCCCCCCCCCCC
PPNNVASIGICIPPLFISRPSQFKGLEQALKDLLAQAIPFRLIAEEHLITGWDGLDYLIY
CCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHEEECCCCCCEEEE
TPTGLSGQGKRKLQGFCAAGGTAISTSDLIGLDYEITYETFMAAPSPKSEGF
CCCCCCCCCCHHHHHHHCCCCCEEECCCEEECCEEEEHHHHCCCCCCCCCCC
>Mature Secondary Structure
MILPAGFNTKTIYLDGRLKADLKWKGAREEALKAIEAGAYLFWDINIGLMDDLPFALINQ
CEECCCCCCEEEEECCEEEECEEECCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHCC
TQYLSLSLSLEHFRDSLWKEFKHKTIGISLYKGSADFSLKFPWDAHQIENLKEWIAHLFK
CEEEEEEEEHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHH
DEIQLKEETGVSVSSLAHLTVADFCQTEQGQQLIRLFCRDVSMEYISLLISRLPDTLPAY
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH
LFLDVTHFANHPLYQMQLLHPARFEQFNLALKGFTLPFFAWGWQSQATSLGYSGIHPLPI
HEEEEHHHCCCCEEEEEECCCCCHHHHEEEEECCCCCEEEECCCCHHHHCCCCCCCCCCC
PPNNVASIGICIPPLFISRPSQFKGLEQALKDLLAQAIPFRLIAEEHLITGWDGLDYLIY
CCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHEEECCCCCCEEEE
TPTGLSGQGKRKLQGFCAAGGTAISTSDLIGLDYEITYETFMAAPSPKSEGF
CCCCCCCCCCHHHHHHHCCCCCEEECCCEEECCEEEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA