| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446865
Identifier: 46446865
GI number: 46446865
Start: 1465793
End: 1466857
Strand: Direct
Name: 46446865
Synonym: pc1231
Alternate gene names: NA
Gene position: 1465793-1466857 (Clockwise)
Preceding gene: 46446863
Following gene: 46446866
Centisome position: 60.71
GC content: 33.9
Gene sequence:
>1065_bases ATGCATAGTCTATCAAATAGCGTAGTTGGGCAAAAAGTAAACTTTGAAAATGATCATGAACAAGCCCCAAAAGGTTTTGA GAATGCACAAAATCTTCTTCGCGAAAAAATTCACTCTTGCGTCATTTCTACAGTTCAAAAAATTGCAGAAGATTATGAAA AACGTCTTCAAGGTTACGAAAATAATGTTGAATGTTTAAACGGCGGTATTTGGATGCCTAACGCCTACTTTAAAGCGCTA GACGAAAAAAAAAAAATAACCCGTTTAAAATACATGGTTTCTAAAAATTATTTTGACCATTTTTACTCTAAAGATTTTGA GGCTATTCCCTCAGCTGATGCTATACACAAAACAGGCTTTGTCAAATATCAAATCAGAATAAAAAAAGGTGTTAGTCCTT CAGAGGCTTTAAAATCGGCACAACGAGGTCCAACCCTAGTGGATTGTGCAACAGTCTGTCAGATTGGTCAATACCAAGCT TTACTCGAAGTGTTAGGGGAAGAAAAATTTAATTATTTATTTGGTCATGAAACAGGAAGCCCTTTAGTTTTGTGTAGTTA CGCTATAGATAACCCACTTATGCCATTCTTGAGACAATACACAATCAAAAATAGCGAAAAATGGCCAATAAACGAAGTAA ACTTAGAAAAAGGCTGGCGCGTAGTTTTCAATAATGTTTCGAAATACAATATAAAGCATGGAATGAGAGGCGATGCCGTA TCTTTCAATGTGATTTGCTTTGATACAACAGTAGATAAAGAAAAATTTATTGGTTTTGGATTAGGTGGTAAAGAGGTAAC AGAAGAGCAGATTGAGCAAGCCCTTATTAACGAATACAACGCTCAACCAATCACAGAAAAGCTTTCTGCTGATCATGAGG GGAACAATTGCAATTCTGAAGATATTATAACATTAGAAAGCGCCAAAAAAGACCCTCATTTTGGTTTTGATTCTAATCTT AGGCTAGATTTAAATATAGACTTAATTCAAGAGTTATCAACAATAAGTAAAGAAGATTTTACTATTGAAAAAATTAAAGC AATCATTCAAAGATTCAATAGTTGA
Upstream 100 bases:
>100_bases CTAAATAGCAGATTATTTGTACAAAATTAATTGTGAATTTAATCTAAAAAAGAAACGATAAAAATCATATTTTTTACAGA AAAAACTAGGAAAATTTCTT
Downstream 100 bases:
>100_bases TTAATTTTTTTCATTAAAAATTGCTTCATCTTATTTTAATTGAATTTCCTAATTTTAACGTAGAATTCCTTAAAATTATT AACTTGCTCCAAAAATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MHSLSNSVVGQKVNFENDHEQAPKGFENAQNLLREKIHSCVISTVQKIAEDYEKRLQGYENNVECLNGGIWMPNAYFKAL DEKKKITRLKYMVSKNYFDHFYSKDFEAIPSADAIHKTGFVKYQIRIKKGVSPSEALKSAQRGPTLVDCATVCQIGQYQA LLEVLGEEKFNYLFGHETGSPLVLCSYAIDNPLMPFLRQYTIKNSEKWPINEVNLEKGWRVVFNNVSKYNIKHGMRGDAV SFNVICFDTTVDKEKFIGFGLGGKEVTEEQIEQALINEYNAQPITEKLSADHEGNNCNSEDIITLESAKKDPHFGFDSNL RLDLNIDLIQELSTISKEDFTIEKIKAIIQRFNS
Sequences:
>Translated_354_residues MHSLSNSVVGQKVNFENDHEQAPKGFENAQNLLREKIHSCVISTVQKIAEDYEKRLQGYENNVECLNGGIWMPNAYFKAL DEKKKITRLKYMVSKNYFDHFYSKDFEAIPSADAIHKTGFVKYQIRIKKGVSPSEALKSAQRGPTLVDCATVCQIGQYQA LLEVLGEEKFNYLFGHETGSPLVLCSYAIDNPLMPFLRQYTIKNSEKWPINEVNLEKGWRVVFNNVSKYNIKHGMRGDAV SFNVICFDTTVDKEKFIGFGLGGKEVTEEQIEQALINEYNAQPITEKLSADHEGNNCNSEDIITLESAKKDPHFGFDSNL RLDLNIDLIQELSTISKEDFTIEKIKAIIQRFNS >Mature_354_residues MHSLSNSVVGQKVNFENDHEQAPKGFENAQNLLREKIHSCVISTVQKIAEDYEKRLQGYENNVECLNGGIWMPNAYFKAL DEKKKITRLKYMVSKNYFDHFYSKDFEAIPSADAIHKTGFVKYQIRIKKGVSPSEALKSAQRGPTLVDCATVCQIGQYQA LLEVLGEEKFNYLFGHETGSPLVLCSYAIDNPLMPFLRQYTIKNSEKWPINEVNLEKGWRVVFNNVSKYNIKHGMRGDAV SFNVICFDTTVDKEKFIGFGLGGKEVTEEQIEQALINEYNAQPITEKLSADHEGNNCNSEDIITLESAKKDPHFGFDSNL RLDLNIDLIQELSTISKEDFTIEKIKAIIQRFNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40316; Mature: 40316
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLSNSVVGQKVNFENDHEQAPKGFENAQNLLREKIHSCVISTVQKIAEDYEKRLQGYE CCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NNVECLNGGIWMPNAYFKALDEKKKITRLKYMVSKNYFDHFYSKDFEAIPSADAIHKTGF CCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCE VKYQIRIKKGVSPSEALKSAQRGPTLVDCATVCQIGQYQALLEVLGEEKFNYLFGHETGS EEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC PLVLCSYAIDNPLMPFLRQYTIKNSEKWPINEVNLEKGWRVVFNNVSKYNIKHGMRGDAV CEEEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCE SFNVICFDTTVDKEKFIGFGLGGKEVTEEQIEQALINEYNAQPITEKLSADHEGNNCNSE EEEEEEEECCCCHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC DIITLESAKKDPHFGFDSNLRLDLNIDLIQELSTISKEDFTIEKIKAIIQRFNS CEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MHSLSNSVVGQKVNFENDHEQAPKGFENAQNLLREKIHSCVISTVQKIAEDYEKRLQGYE CCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NNVECLNGGIWMPNAYFKALDEKKKITRLKYMVSKNYFDHFYSKDFEAIPSADAIHKTGF CCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCE VKYQIRIKKGVSPSEALKSAQRGPTLVDCATVCQIGQYQALLEVLGEEKFNYLFGHETGS EEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC PLVLCSYAIDNPLMPFLRQYTIKNSEKWPINEVNLEKGWRVVFNNVSKYNIKHGMRGDAV CEEEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCE SFNVICFDTTVDKEKFIGFGLGGKEVTEEQIEQALINEYNAQPITEKLSADHEGNNCNSE EEEEEEEECCCCHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC DIITLESAKKDPHFGFDSNLRLDLNIDLIQELSTISKEDFTIEKIKAIIQRFNS CEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA