Click here to switch to the map view.

The map label for this gene is 46446829

Identifier: 46446829

GI number: 46446829

Start: 1428388

End: 1428618

Strand: Direct

Name: 46446829

Synonym: pc1195

Alternate gene names: NA

Gene position: 1428388-1428618 (Clockwise)

Preceding gene: 46446828

Following gene: 46446830

Centisome position: 59.16

GC content: 42.86

Gene sequence:

>231_bases
ATGCTTAAATGTGCTACTTTTCTACGCTCATCAATGGAGCATCTTATGGAAGCGCACAGAAGACATGATATATCCGACAG
AGTTTGGAATTTACTGGGACCTCATTTGCCAGGAAGAAGAGGGGCTTGGGGTGGTATAGCAAGAGATAATAGGACTTTTA
TCAATGCAGTATTTTGGATATTAAGAACGGGAGCTCCATGGAGGGATTTGCCTCCAGATTACGGTTGTTGA

Upstream 100 bases:

>100_bases
TTTTTAAGTCATTTTTTAGCTTGTCTTTAAGTTGTTTTTTGTTCTAGATCAAACTATTCAGCGCTGTTTCTAGATAGTGT
AGTCACGAGAAATAAAATAA

Downstream 100 bases:

>100_bases
AGAAATACTCATCGGCGATTTATCCGATGGCGCAATCAGAGAGTCTGGGAAAGGTTGCTTGAGGTGCTGATTGACGATCC
AGATTATGAATGGCTTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: ISRin4 Transposase OrfA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MLKCATFLRSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGAWGGIARDNRTFINAVFWILRTGAPWRDLPPDYGC

Sequences:

>Translated_76_residues
MLKCATFLRSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGAWGGIARDNRTFINAVFWILRTGAPWRDLPPDYGC
>Mature_76_residues
MLKCATFLRSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGAWGGIARDNRTFINAVFWILRTGAPWRDLPPDYGC

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8814; Mature: 8814

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKCATFLRSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGAWGGIARDNRTFINAVFWI
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LRTGAPWRDLPPDYGC
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKCATFLRSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGAWGGIARDNRTFINAVFWI
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LRTGAPWRDLPPDYGC
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA