| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446804
Identifier: 46446804
GI number: 46446804
Start: 1398232
End: 1398474
Strand: Direct
Name: 46446804
Synonym: pc1170
Alternate gene names: NA
Gene position: 1398232-1398474 (Clockwise)
Preceding gene: 46446800
Following gene: 46446805
Centisome position: 57.91
GC content: 29.22
Gene sequence:
>243_bases ATGGTTAACGTTTATTTTTCCATGTCTATGACTAAGTTTTGTATCCCTCAGTTTATTATCTCAATGCGCTTTAGTCAAAT TGGTTTCGACATTTTTCTAGATATGTCCTTTTCTGTCAATGCTTTGATATCGAAATTCTCACTCCTTTTTTCATCAAAGT TATTTTCCATTAAAAATATCGCTTTAAAAAACTCTCTTGATGATTATAAAAAATGCCATATGGTAGACTTGATAAATGAA TAG
Upstream 100 bases:
>100_bases GCATCTATAAACCCGCGCTCTCGTAAAACATCCATTACATTTGTCATATTTAAATCCTTGCCTAAGTGTCGAAAGTGCCA TATCTAAAGTTCAATAATTA
Downstream 100 bases:
>100_bases AGACTTTTGACTTTTAATTTGAATTAAAAACTTTATTTATTTGATTTTTTTTTTAAATCCTCTATTCTCCGAACTAAGTC CTAGTTTGAGCATTTTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNIALKNSLDDYKKCHMVDLINE
Sequences:
>Translated_80_residues MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNIALKNSLDDYKKCHMVDLINE >Mature_80_residues MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNIALKNSLDDYKKCHMVDLINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9294; Mature: 9294
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNI CEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ALKNSLDDYKKCHMVDLINE HHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNI CEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH ALKNSLDDYKKCHMVDLINE HHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA