BacMap

Definition	Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession	NC_005861
Length	2,414,465

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 46446790

GI number: 46446790

Start: 1384921

End: 1385628

Strand: Reverse

Name: fabG [H]

Synonym: pc1156

Alternate gene names: 46446790

Gene position: 1385628-1384921 (Counterclockwise)

Preceding gene: 46446791

Following gene: 46446789

Centisome position: 57.39

GC content: 37.85

Gene sequence:

>708_bases
ATGGCTTGGACATTAGTGACTGGAGGGGCGAAAAGGCTTGGGTCTCACCTGTGTTATGCGCTTGCTGAACAAGGATATTC
TGTCGTTGTTCATTATAATAAAAGTGAGCAAGAAGCTAAAGATGTTGTTAAGAAATGTCAAGAAATAGGGGTGGAAGCCG
CTGCAATTCAAGGGGATTTTTCGAGCAACGAAGCTATCCTGGACTTTACTAAACGGTACTTACTCGAGTTTAAAGAAACA
ACAAATTTAATTAATAATGTAGGAAATTATTTTGTTCGATCTGGATTGCAAACGCCTTTATCAGATTGGATGGCCCTTTT
TCAAATAAACTTACACGCTCCATTTATTCTTATCCAAAAATTGATCCCATCTTTGTTAGAATCTAAAGGTCAAATTATTA
ATTTAGGGGTAAGCGGTTTGTACGAAAACCCTGCTGGAATTTATTCAACAGCCTATCGTATGACTAAATCGTGTTTGTGG
ATGTTAACAAAATCTTTGTCGGTTGAATTGGCTTCTAAAGGAGTGAGAGTTAATATGGTTTCCCCGGGTCAAACGAATCT
TTCCGTAGACTTGCAACATCAAAAGCATAAATTACCAATGAATAGGCCTTGTGAGTGTAGAGAAATTAGTCGAGTCATCA
CTTTCCTTCTTCATCCCGATAGCGTTTATATCACAGGTCAAAATATTGAAATAGCCGGAGGAAGTTAA

Upstream 100 bases:

>100_bases
AGTTTGATGTTCAATGGGTCCACTTGCGTATTAAAAAACCCGGCGCAATTTCTAGTGCAAATTTCGCTTTAGTTGAAATT
GAGCAAGAGAGGAGTTGTTG

Downstream 100 bases:

>100_bases
ATTCATGTATGACCAAGACAACGATTTTTCTAATCGAATGAAGCTTTTCATTGAAAATGCTATTATGGTAGGCCGTTTCT
ATCAAAGTTCGCAAACGGGC

Product: putative 3-ketoacyl-acyl carrier protein reductase, fabG

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAWTLVTGGAKRLGSHLCYALAEQGYSVVVHYNKSEQEAKDVVKKCQEIGVEAAAIQGDFSSNEAILDFTKRYLLEFKET
TNLINNVGNYFVRSGLQTPLSDWMALFQINLHAPFILIQKLIPSLLESKGQIINLGVSGLYENPAGIYSTAYRMTKSCLW
MLTKSLSVELASKGVRVNMVSPGQTNLSVDLQHQKHKLPMNRPCECREISRVITFLLHPDSVYITGQNIEIAGGS

Sequences:

>Translated_235_residues
MAWTLVTGGAKRLGSHLCYALAEQGYSVVVHYNKSEQEAKDVVKKCQEIGVEAAAIQGDFSSNEAILDFTKRYLLEFKET
TNLINNVGNYFVRSGLQTPLSDWMALFQINLHAPFILIQKLIPSLLESKGQIINLGVSGLYENPAGIYSTAYRMTKSCLW
MLTKSLSVELASKGVRVNMVSPGQTNLSVDLQHQKHKLPMNRPCECREISRVITFLLHPDSVYITGQNIEIAGGS
>Mature_234_residues
AWTLVTGGAKRLGSHLCYALAEQGYSVVVHYNKSEQEAKDVVKKCQEIGVEAAAIQGDFSSNEAILDFTKRYLLEFKETT
NLINNVGNYFVRSGLQTPLSDWMALFQINLHAPFILIQKLIPSLLESKGQIINLGVSGLYENPAGIYSTAYRMTKSCLWM
LTKSLSVELASKGVRVNMVSPGQTNLSVDLQHQKHKLPMNRPCECREISRVITFLLHPDSVYITGQNIEIAGGS

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI19923817, Length=247, Percent_Identity=29.1497975708502, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=27.9166666666667, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=27.5303643724696, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI32483357, Length=241, Percent_Identity=26.1410788381743, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI33667109, Length=180, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=27.5720164609054, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=26.7206477732794, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=26.9709543568465, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082160, Length=242, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=27.4193548387097, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=23.6514522821577, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=27.710843373494, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=22.5941422594142, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI2367365, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=23.9669421487603, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=24.8062015503876, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=22.9166666666667, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=256, Percent_Identity=30.46875, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=28.90625, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=257, Percent_Identity=29.1828793774319, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=256, Percent_Identity=26.953125, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=256, Percent_Identity=26.171875, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=26.6393442622951, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=28.6274509803922, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17544670, Length=257, Percent_Identity=25.2918287937743, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=25.6809338521401, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=26.171875, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=26.8482490272374, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=24.9027237354086, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=26.3565891472868, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=25.5905511811024, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=25.2918287937743, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=25.9842519685039, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=180, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=238, Percent_Identity=26.0504201680672, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=257, Percent_Identity=26.8482490272374, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=24.2307692307692, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=255, Percent_Identity=25.8823529411765, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=29.3877551020408, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=26.1224489795918, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=30.4166666666667, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=26.7206477732794, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=28.8617886178862, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=26.1224489795918, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355319, Length=241, Percent_Identity=26.1410788381743, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24644337, Length=217, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26083; Mature: 25952

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTLVTGGAKRLGSHLCYALAEQGYSVVVHYNKSEQEAKDVVKKCQEIGVEAAAIQGDF
CEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCC
SSNEAILDFTKRYLLEFKETTNLINNVGNYFVRSGLQTPLSDWMALFQINLHAPFILIQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH
LIPSLLESKGQIINLGVSGLYENPAGIYSTAYRMTKSCLWMLTKSLSVELASKGVRVNMV
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
SPGQTNLSVDLQHQKHKLPMNRPCECREISRVITFLLHPDSVYITGQNIEIAGGS
CCCCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCC
>Mature Secondary Structure 
AWTLVTGGAKRLGSHLCYALAEQGYSVVVHYNKSEQEAKDVVKKCQEIGVEAAAIQGDF
EEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCC
SSNEAILDFTKRYLLEFKETTNLINNVGNYFVRSGLQTPLSDWMALFQINLHAPFILIQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH
LIPSLLESKGQIINLGVSGLYENPAGIYSTAYRMTKSCLWMLTKSLSVELASKGVRVNMV
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
SPGQTNLSVDLQHQKHKLPMNRPCECREISRVITFLLHPDSVYITGQNIEIAGGS
CCCCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA