Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446782

Identifier: 46446782

GI number: 46446782

Start: 1377919

End: 1378458

Strand: Direct

Name: 46446782

Synonym: pc1148

Alternate gene names: NA

Gene position: 1377919-1378458 (Clockwise)

Preceding gene: 46446781

Following gene: 46446783

Centisome position: 57.07

GC content: 32.78

Gene sequence:

>540_bases
ATGACTCGAATCAGCCCTATTACAAAAGAAGAAGCTAATCAAAACATTACCCAAATTTACAGTGGTTTAGAAAAAAAAAT
GGGTCGCGTTCTGAATATTTTCCAAAATATGGGAAATTCTGAAGCAGCCTTAAAAGGGTATTTAGGATTAAGTGAAGCAG
CATCTCAGACAAGCTTAAGTCCTAAACTACGAGAACAACTTGCTTTAGTGGTAGGTCAAACAAATGATTGTCAATATTGC
TTATCAGCACATACTGTGAGTGCTAAATTAGCCGGTCTACAAGAGAAAGATATTTTAGAATCACGACTAGGGCATTCTCA
AGATAAAAAAACAGAAGCCATTTTAACTTTTGCCAAAACTATTGTGGAAAGACGAGCTCAAGTTTCAGATCAAGATATAG
AGAAACTAAAATCCGCTGGCATTTCAGATCAAGAAATTGTGGAAATTATTCTAGTTGTTGTTTTGAATATTTTTACTAAT
TATTTTAATCATATTACAGATCCTCAAATTGATTTTCCTTTTGCTCCAAAAATTAATTAA

Upstream 100 bases:

>100_bases
GGTTTTTTCAGCCGCGGAATTAATGATGAAGCAGAATTAGAATCTACTCAATAATTGTATTTTTTAAACATGTCCATCTA
TTTTTAATCAGAGGTATAAA

Downstream 100 bases:

>100_bases
ACAAATAAGGAGTATTTATGACTATTAATCTCAATTTAGATCAAAGTGTCAGACAGCAAATTGCTCAGTTTTTAAGTTTG
ATATTGTCTGATACCTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Carboxymuconolactone Decarboxylase; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase-Like Protein; Mip Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Peroxidase; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTRISPITKEEANQNITQIYSGLEKKMGRVLNIFQNMGNSEAALKGYLGLSEAASQTSLSPKLREQLALVVGQTNDCQYC
LSAHTVSAKLAGLQEKDILESRLGHSQDKKTEAILTFAKTIVERRAQVSDQDIEKLKSAGISDQEIVEIILVVVLNIFTN
YFNHITDPQIDFPFAPKIN

Sequences:

>Translated_179_residues
MTRISPITKEEANQNITQIYSGLEKKMGRVLNIFQNMGNSEAALKGYLGLSEAASQTSLSPKLREQLALVVGQTNDCQYC
LSAHTVSAKLAGLQEKDILESRLGHSQDKKTEAILTFAKTIVERRAQVSDQDIEKLKSAGISDQEIVEIILVVVLNIFTN
YFNHITDPQIDFPFAPKIN
>Mature_178_residues
TRISPITKEEANQNITQIYSGLEKKMGRVLNIFQNMGNSEAALKGYLGLSEAASQTSLSPKLREQLALVVGQTNDCQYCL
SAHTVSAKLAGLQEKDILESRLGHSQDKKTEAILTFAKTIVERRAQVSDQDIEKLKSAGISDQEIVEIILVVVLNIFTNY
FNHITDPQIDFPFAPKIN

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19852; Mature: 19721

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRISPITKEEANQNITQIYSGLEKKMGRVLNIFQNMGNSEAALKGYLGLSEAASQTSLS
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PKLREQLALVVGQTNDCQYCLSAHTVSAKLAGLQEKDILESRLGHSQDKKTEAILTFAKT
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
IVERRAQVSDQDIEKLKSAGISDQEIVEIILVVVLNIFTNYFNHITDPQIDFPFAPKIN
HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRISPITKEEANQNITQIYSGLEKKMGRVLNIFQNMGNSEAALKGYLGLSEAASQTSLS
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PKLREQLALVVGQTNDCQYCLSAHTVSAKLAGLQEKDILESRLGHSQDKKTEAILTFAKT
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
IVERRAQVSDQDIEKLKSAGISDQEIVEIILVVVLNIFTNYFNHITDPQIDFPFAPKIN
HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA