| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446779
Identifier: 46446779
GI number: 46446779
Start: 1376309
End: 1376572
Strand: Direct
Name: 46446779
Synonym: pc1145
Alternate gene names: NA
Gene position: 1376309-1376572 (Clockwise)
Preceding gene: 46446778
Following gene: 46446780
Centisome position: 57.0
GC content: 38.64
Gene sequence:
>264_bases ATGGAAATTGATCTCAGTTATAACCAAATAAGAGATAAGAGAGCAGAAGCAATTGCTTATTACCTTATTTCCAATGCGAC TATTGAGTCACTCTACCTTAACAGAAACCACATCAGCGATAAGGGAATGGAAGCTTTTGCTCAGGCTCTGGCTTCCAATA CTGTTCTTGAAACACTCTATCTCATCAATAACCAAATAGGCGAGAGGGGAAAGAAAGCTCTTTATGGTTTAGGTCTTAGG TATGGTTGTAAAATAAGGCGCTAA
Upstream 100 bases:
>100_bases ATGGCGCTTTATTTAAGAGTATTTTTGGTGTTTACAAGTATAAAATTGTTCGTATAGTGCCTCCAAAATCAGCGAATATC TCTCTTAGAAGAGCATCTCA
Downstream 100 bases:
>100_bases AGCATGCAGAAGAAGATACTCATCAAATTGATCCATCAGCAGAACATAGTGCTTATTAGGTTTAATACATCTTGGAAGGC ATGATTCAAAAATGCATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MEIDLSYNQIRDKRAEAIAYYLISNATIESLYLNRNHISDKGMEAFAQALASNTVLETLYLINNQIGERGKKALYGLGLR YGCKIRR
Sequences:
>Translated_87_residues MEIDLSYNQIRDKRAEAIAYYLISNATIESLYLNRNHISDKGMEAFAQALASNTVLETLYLINNQIGERGKKALYGLGLR YGCKIRR >Mature_87_residues MEIDLSYNQIRDKRAEAIAYYLISNATIESLYLNRNHISDKGMEAFAQALASNTVLETLYLINNQIGERGKKALYGLGLR YGCKIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9931; Mature: 9931
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDLSYNQIRDKRAEAIAYYLISNATIESLYLNRNHISDKGMEAFAQALASNTVLETLY CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LINNQIGERGKKALYGLGLRYGCKIRR HHHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MEIDLSYNQIRDKRAEAIAYYLISNATIESLYLNRNHISDKGMEAFAQALASNTVLETLY CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LINNQIGERGKKALYGLGLRYGCKIRR HHHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA