| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446746
Identifier: 46446746
GI number: 46446746
Start: 1332028
End: 1332606
Strand: Direct
Name: 46446746
Synonym: pc1112
Alternate gene names: NA
Gene position: 1332028-1332606 (Clockwise)
Preceding gene: 46446745
Following gene: 46446748
Centisome position: 55.17
GC content: 41.11
Gene sequence:
>579_bases ATGACTATTAAAGTTGAAAGTATTACAAGGACGACTGAAGTAGGTCAAGGAACAAACCTCCCAAGTCAATACCAACACTT AATCACCTTAAGCCCTGCTTTAATTAACGAAATGGGAAAAAAAAGCATTGATATCCTTTTTTTAGATTTTGGTATGGCTG AAGGTCAACTACGCCTCCAAAATAAAAGGCTGTCTTATCAACTACGTTTGATTGAAAAAGATCGTCAAACAGAAAAAGTG GAAAAAAAATTAGCTGAATATGACCGCAGCGCTCCTATCGTAACTGCAGCTTTTGCGGGTGTGGCAGCGATTGCTGGAGC ATTTGCTGGGGGAGCAGGAGCTCAAATTGGACAAGGAATCAGTCAGACTATTAGTACAACACGTGAACATCTTGATAATA AGTCTAGGGGAAGAGTTGAACACCATGATCACCAGTATCAGACAGTGGGTGCTTTAATTCAAGACCATTCTCAAGAACTT CAGCGGGAAAATCAAGAGTTTGATCGCGCTCTATCTACTGCTGATCGTGCTCATCAAGCTTCTCAGCGTGTGATTGAACA ATTAGCTAACGCGGCTTAA
Upstream 100 bases:
>100_bases TTCAAAGAAATGTTAATTAAACTTATCAAAAGTCTGGAAAGAATGAGAAGAAATGTTTCTGCAACTTAAAATTAATTTAA TGATAAAATAAGGAGTCTTT
Downstream 100 bases:
>100_bases GCAGTTAGTAAACCTCTTTAAAAATAGTTTTTAAAAGAGGTTTACTTTTTAATTTGTAAATAAACTTCAGCAACTCCCCA AGTGAATTTGGCCGGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTIKVESITRTTEVGQGTNLPSQYQHLITLSPALINEMGKKSIDILFLDFGMAEGQLRLQNKRLSYQLRLIEKDRQTEKV EKKLAEYDRSAPIVTAAFAGVAAIAGAFAGGAGAQIGQGISQTISTTREHLDNKSRGRVEHHDHQYQTVGALIQDHSQEL QRENQEFDRALSTADRAHQASQRVIEQLANAA
Sequences:
>Translated_192_residues MTIKVESITRTTEVGQGTNLPSQYQHLITLSPALINEMGKKSIDILFLDFGMAEGQLRLQNKRLSYQLRLIEKDRQTEKV EKKLAEYDRSAPIVTAAFAGVAAIAGAFAGGAGAQIGQGISQTISTTREHLDNKSRGRVEHHDHQYQTVGALIQDHSQEL QRENQEFDRALSTADRAHQASQRVIEQLANAA >Mature_191_residues TIKVESITRTTEVGQGTNLPSQYQHLITLSPALINEMGKKSIDILFLDFGMAEGQLRLQNKRLSYQLRLIEKDRQTEKVE KKLAEYDRSAPIVTAAFAGVAAIAGAFAGGAGAQIGQGISQTISTTREHLDNKSRGRVEHHDHQYQTVGALIQDHSQELQ RENQEFDRALSTADRAHQASQRVIEQLANAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21221; Mature: 21090
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKVESITRTTEVGQGTNLPSQYQHLITLSPALINEMGKKSIDILFLDFGMAEGQLRLQ CEEEECHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCHHHHH NKRLSYQLRLIEKDRQTEKVEKKLAEYDRSAPIVTAAFAGVAAIAGAFAGGAGAQIGQGI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH SQTISTTREHLDNKSRGRVEHHDHQYQTVGALIQDHSQELQRENQEFDRALSTADRAHQA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQRVIEQLANAA HHHHHHHHHCCC >Mature Secondary Structure TIKVESITRTTEVGQGTNLPSQYQHLITLSPALINEMGKKSIDILFLDFGMAEGQLRLQ EEEECHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCHHHHH NKRLSYQLRLIEKDRQTEKVEKKLAEYDRSAPIVTAAFAGVAAIAGAFAGGAGAQIGQGI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH SQTISTTREHLDNKSRGRVEHHDHQYQTVGALIQDHSQELQRENQEFDRALSTADRAHQA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQRVIEQLANAA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA